RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 EIF3BP55884 814 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 SYDE2Q5VT97 1194 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 CRYGNQ8WXF5 182 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 KCNQ5Q9NR82 932 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 RASAL2Q9UJF2 1139 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 GGA2Q9UJY4 613 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 ZMYM2Q9UBW7 1377 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 FTLP02792 175 aaPredicted RBP16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 VIMP08670 466 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 FGFR4P22455 802 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 IFI35P80217 286 aaPredicted RBP16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 PPATQ06203 517 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 UBAP2Q5T6F2 1119 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 DUPD1Q68J44 220 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 HVCN1Q96D96 273 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 BORCS6Q96GS4 357 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 DBNDD1Q9H9R9 158 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 PKD2L1Q9P0L9 805 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 ATMINO43313 823 aaPredicted RBP16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 CRKP46108 304 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 SCTRP47872 440 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 TBC1D10BQ4KMP7 808 aaPredicted RBP16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 CCDC38Q502W7 563 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 PHLDB3Q6NSJ2 640 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 CYB5D1Q6P9G0 228 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 TAX1BP1Q86VP1 789 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 SEC14L1Q92503 715 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 PABPC3Q9H361 631 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 SEMA4AQ9H3S1 761 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 CNOT10Q9H9A5 744 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 AGPAT3Q9NRZ7 376 aa16.39■□□□□ 0.21
SEMA3B-203ENST00000419007 BHMG1C9JSJ3 638 aaPredicted RBP16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 DDX39AO00148 427 aaKnown RBP16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 RASSF9O75901 435 aa16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 SLITRK3O94933 977 aa16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 MAPK7Q13164 816 aa16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 DRP2Q13474 957 aa16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 BANK1Q8NDB2 785 aa16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 ZKSCAN4Q969J2 545 aaPredicted RBP16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 RNF25Q96BH1 459 aaPredicted RBP16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 POLR3CQ9BUI4 534 aaPredicted RBP16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 NCANO14594 1321 aa16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 ANKRD62A6NC57 917 aa16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 DRD4P21917 467 aa16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 BYSLQ13895 437 aaKnown RBP16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 E2F5Q15329 346 aa16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 DEFB132Q7Z7B7 95 aa16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 NYAP2Q9P242 653 aa16.38■□□□□ 0.21
SEMA3B-203ENST00000419007 CCDC169A6NNP5 214 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 GAS7O60861 476 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 PLCB4Q15147 1175 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 SNCBQ16143 134 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 SIAH1Q8IUQ4 282 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 PARP9Q8IXQ6 854 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 CCDC105Q8IYK2 499 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 FUKQ8N0W3 1084 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 UBL4BQ8N7F7 174 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 CCDC197Q8NCU1 140 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 GPR88Q9GZN0 384 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 ZDHHC18Q9NUE0 388 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 INTS9Q9NV88 658 aaKnown RBP16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 PI4KBQ9UBF8 816 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 TISP43B9A030 160 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 OPLAHO14841 1288 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 ABCB5Q2M3G0 1257 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 ERMARDQ5T6L9 678 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 CCDC174Q6PII3 467 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 C1orf186Q6ZWK4 172 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 ZNF720Q7Z2F6 126 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 OLIG1Q8TAK6 271 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 EPS8L3Q8TE67 593 aaKnown RBP16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 AGPAT1Q99943 283 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 TTC7AQ9ULT0 858 aaPredicted RBP16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 KIAA0391O15091 583 aaKnown RBP16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 BMP3P12645 472 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 RPL21P46778 160 aaKnown RBP16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 KCNJ1P48048 391 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 DLG4P78352 724 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 STXBP4Q6ZWJ1 553 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 ANKS4BQ8N8V4 417 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 C3orf20Q8ND61 904 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 MGARPQ8TDB4 240 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 TLCD1Q96CP7 247 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 PRMT1Q99873 361 aaKnown RBP16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 HSD17B14Q9BPX1 270 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 ELAC2Q9BQ52 826 aaKnown RBP16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 FAM129AQ9BZQ8 928 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 GEMIN8Q9NWZ8 242 aaKnown RBP16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 MTRF1LQ9UGC7 380 aaKnown RBP16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 ATAD5Q96QE3 1844 aa16.37■□□□□ 0.21
SEMA3B-203ENST00000419007 EIF3DO15371 548 aaKnown RBP eCLIP16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 GH2P01242 217 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 GCLMP48507 274 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 DDR1Q08345 913 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 PPP1R7Q15435 360 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 MSL1Q68DK7 614 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 ARMC9Q7Z3E5 817 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 GIMAP7Q8NHV1 300 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 BTBD6Q96KE9 485 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms