RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ZNF623O75123 536 aa22.91■■□□□ 1.26
PKNOX1-202ENST00000418336 IBSPP21815 317 aaPredicted RBP22.91■■□□□ 1.26
PKNOX1-202ENST00000418336 COL19A1Q14993 1142 aa22.91■■□□□ 1.26
PKNOX1-202ENST00000418336 ARL6IP4Q66PJ3 421 aaKnown RBP22.91■■□□□ 1.26
PKNOX1-202ENST00000418336 CDCA2Q69YH5 1023 aaPredicted RBP22.91■■□□□ 1.26
PKNOX1-202ENST00000418336 PADI6Q6TGC4 694 aa22.91■■□□□ 1.26
PKNOX1-202ENST00000418336 DTHD1Q6ZMT9 781 aa22.91■■□□□ 1.26
PKNOX1-202ENST00000418336 SNX29Q8TEQ0 813 aa22.91■■□□□ 1.26
PKNOX1-202ENST00000418336 C11orf84Q9BUA3 381 aaPredicted RBP22.91■■□□□ 1.26
PKNOX1-202ENST00000418336 FAM105AQ9NUU6 356 aa22.91■■□□□ 1.26
PKNOX1-202ENST00000418336 DDX19AQ9NUU7 478 aaKnown RBP22.91■■□□□ 1.26
PKNOX1-202ENST00000418336 MTMR6Q9Y217 621 aa22.91■■□□□ 1.26
PKNOX1-202ENST00000418336 E9PMD0 336 aa22.9■■□□□ 1.26
PKNOX1-202ENST00000418336 GRIN1Q05586 938 aa22.9■■□□□ 1.26
PKNOX1-202ENST00000418336 MRPL10Q7Z7H8 261 aaKnown RBP22.9■■□□□ 1.26
PKNOX1-202ENST00000418336 KLHL23Q8NBE8 558 aa22.9■■□□□ 1.26
PKNOX1-202ENST00000418336 SPPL3Q8TCT6 385 aa22.9■■□□□ 1.26
PKNOX1-202ENST00000418336 LRRC15Q8TF66 581 aa22.9■■□□□ 1.26
PKNOX1-202ENST00000418336 RNF216Q9NWF9 866 aaPredicted RBP22.9■■□□□ 1.26
PKNOX1-202ENST00000418336 PTPAQ15257 358 aa22.89■■□□□ 1.25
PKNOX1-202ENST00000418336 NAALADL2Q58DX5 795 aa22.89■■□□□ 1.25
PKNOX1-202ENST00000418336 DAW1Q8N136 415 aa22.89■■□□□ 1.25
PKNOX1-202ENST00000418336 COLGALT1Q8NBJ5 622 aa22.89■■□□□ 1.25
PKNOX1-202ENST00000418336 MCPH1Q8NEM0 835 aa22.89■■□□□ 1.25
PKNOX1-202ENST00000418336 LPPQ93052 612 aa22.89■■□□□ 1.25
PKNOX1-202ENST00000418336 BHMT2Q9H2M3 363 aa22.89■■□□□ 1.25
PKNOX1-202ENST00000418336 ALG13Q9NP73 1137 aaKnown RBP22.89■■□□□ 1.25
PKNOX1-202ENST00000418336 THEGQ9P2T0 379 aa22.89■■□□□ 1.25
PKNOX1-202ENST00000418336 STK24Q9Y6E0 443 aa22.89■■□□□ 1.25
PKNOX1-202ENST00000418336 TTLL13PA6NNM8 815 aa22.88■■□□□ 1.25
PKNOX1-202ENST00000418336 EYA4O95677 639 aa22.88■■□□□ 1.25
PKNOX1-202ENST00000418336 EDN1P05305 212 aa22.88■■□□□ 1.25
PKNOX1-202ENST00000418336 PCBP1Q15365 356 aaKnown RBP eCLIP22.88■■□□□ 1.25
PKNOX1-202ENST00000418336 AGMOQ6ZNB7 445 aa22.88■■□□□ 1.25
PKNOX1-202ENST00000418336 MAEAQ7L5Y9 396 aa22.88■■□□□ 1.25
PKNOX1-202ENST00000418336 SMG8Q8ND04 991 aaKnown RBP22.88■■□□□ 1.25
PKNOX1-202ENST00000418336 HELQQ8TDG4 1101 aa22.88■■□□□ 1.25
PKNOX1-202ENST00000418336 ATXN2LQ8WWM7 1075 aaKnown RBP22.88■■□□□ 1.25
PKNOX1-202ENST00000418336 RAB34Q9BZG1 259 aa22.88■■□□□ 1.25
PKNOX1-202ENST00000418336 CCDC113Q9H0I3 377 aa22.88■■□□□ 1.25
PKNOX1-202ENST00000418336 LMAN2LQ9H0V9 348 aa22.88■■□□□ 1.25
PKNOX1-202ENST00000418336 FOXD4L1Q9NU39 408 aa22.88■■□□□ 1.25
PKNOX1-202ENST00000418336 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 VPS37CA5D8V6 355 aaPredicted RBP22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 ARHGEF35A5YM69 484 aa22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 VWA3AA6NCI4 1184 aa22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 B4GALT5O43286 388 aa22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 HOXA2O43364 376 aa22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 PDCP20941 246 aa22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 TFF2Q03403 129 aa22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 MAPK7Q13164 816 aa22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 TFDP1Q14186 410 aa22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 TMEM119Q4V9L6 283 aa22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 TWF2Q6IBS0 349 aaKnown RBP22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 FAM173BQ6P4H8 233 aa22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 PPP4R3CPQ6ZMV5 832 aa22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 COL25A1Q9BXS0 654 aaPredicted RBP22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 EIF2AQ9BY44 585 aaKnown RBP22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 FZD8Q9H461 694 aa22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 POLD4Q9HCU8 107 aa22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 PCDHB2Q9Y5E7 798 aa22.87■■□□□ 1.25
PKNOX1-202ENST00000418336 B4GALT3O60512 393 aa22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 OFD1O75665 1012 aa22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 ARF4P18085 180 aaPredicted RBP22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 IRS1P35568 1242 aa22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 RAB27AP51159 221 aa22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 AFF1P51825 1210 aaKnown RBP22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 SF3A1Q15459 793 aaKnown RBP22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 PTPROQ16827 1216 aa22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 TCEAL5Q5H9L2 206 aa22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 KRT79Q5XKE5 535 aa22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 C1orf186Q6ZWK4 172 aa22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 CPB2Q96IY4 423 aa22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 CCDC43Q96MW1 224 aaKnown RBP22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 ASB2Q96Q27 587 aa22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 CLIC4Q9Y696 253 aa22.86■■□□□ 1.25
PKNOX1-202ENST00000418336 CUL9Q8IWT3 2517 aa22.85■■□□□ 1.25
PKNOX1-202ENST00000418336 TTC28Q96AY4 2481 aa22.85■■□□□ 1.25
PKNOX1-202ENST00000418336 INO80B-WBP1J3KQ70 363 aa22.85■■□□□ 1.25
PKNOX1-202ENST00000418336 AXLP30530 894 aa22.85■■□□□ 1.25
PKNOX1-202ENST00000418336 FAM187BQ17R55 369 aa22.85■■□□□ 1.25
PKNOX1-202ENST00000418336 LONRF3Q496Y0 759 aa22.85■■□□□ 1.25
PKNOX1-202ENST00000418336 LRRC43Q8N309 656 aa22.85■■□□□ 1.25
PKNOX1-202ENST00000418336 RNF169Q8NCN4 708 aa22.85■■□□□ 1.25
PKNOX1-202ENST00000418336 RUSC1Q9BVN2 902 aa22.85■■□□□ 1.25
PKNOX1-202ENST00000418336 INPPL1O15357 1258 aa22.84■■□□□ 1.25
PKNOX1-202ENST00000418336 SKIP12755 728 aa22.84■■□□□ 1.25
PKNOX1-202ENST00000418336 NCLP19338 710 aaKnown RBP22.84■■□□□ 1.25
PKNOX1-202ENST00000418336 PBX3P40426 434 aa22.84■■□□□ 1.25
PKNOX1-202ENST00000418336 NAMPTP43490 491 aa22.84■■□□□ 1.25
PKNOX1-202ENST00000418336 TIGD5Q53EQ6 642 aa22.84■■□□□ 1.25
PKNOX1-202ENST00000418336 RINT1Q6NUQ1 792 aa22.84■■□□□ 1.25
PKNOX1-202ENST00000418336 POF1BQ8WVV4 589 aa22.84■■□□□ 1.25
PKNOX1-202ENST00000418336 RNF39Q9H2S5 420 aa22.84■■□□□ 1.25
PKNOX1-202ENST00000418336 NSUN3Q9H649 340 aaKnown RBP22.84■■□□□ 1.25
PKNOX1-202ENST00000418336 COG5Q9UP83 839 aa22.84■■□□□ 1.25
PKNOX1-202ENST00000418336 DNM3Q9UQ16 869 aa22.84■■□□□ 1.25
PKNOX1-202ENST00000418336 PCDHGC5Q9Y5F6 944 aa22.84■■□□□ 1.25
PKNOX1-202ENST00000418336 MYH15Q9Y2K3 1946 aa22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 A0A1B0GUA9 196 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms