RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 PHKA2P46019 1235 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 CACNB1Q02641 598 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-206ENST00000417540 MAPK7Q13164 816 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 ORC2Q13416 577 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-206ENST00000417540 PKP1Q13835 747 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 ZRSR1Q15695 479 aaKnown RBP11.37□□□□□ -0.59
HDLBP-206ENST00000417540 FOXD4L5Q5VV16 416 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-206ENST00000417540 LARP1BQ659C4 914 aaKnown RBP11.37□□□□□ -0.59
HDLBP-206ENST00000417540 TWF2Q6IBS0 349 aaKnown RBP11.37□□□□□ -0.59
HDLBP-206ENST00000417540 SLC24A5Q71RS6 500 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 DAW1Q8N136 415 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 KLHL23Q8NBE8 558 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 COLGALT1Q8NBJ5 622 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 FEZF2Q8TBJ5 459 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 FOXD4L4Q8WXT5 416 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-206ENST00000417540 CXCL16Q9H2A7 254 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 BHMT2Q9H2M3 363 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 ANKEF1Q9NU02 776 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 FAM105AQ9NUU6 356 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 TMEM161AQ9NX61 479 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 MTMR6Q9Y217 621 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 HES2Q9Y543 173 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 CLIC4Q9Y696 253 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 CITO14578 2027 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 ARHGEF35A5YM69 484 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 LRRIQ4A6NIV6 560 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 INO80B-WBP1J3KQ70 363 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 DKC1O60832 514 aaKnown RBP eCLIP11.36□□□□□ -0.59
HDLBP-206ENST00000417540 TBX10O75333 385 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 DGAT1O75907 488 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 SYT1P21579 422 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 RPA1P27694 616 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 PTENP60484 403 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 RAD51AP2Q09MP3 1159 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 TMEM119Q4V9L6 283 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 TJAP1Q5JTD0 557 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 HAUS3Q68CZ6 603 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 CDCA2Q69YH5 1023 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-206ENST00000417540 PADI6Q6TGC4 694 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 LRRC43Q8N309 656 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 TMEM130Q8N3G9 435 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 SMG8Q8ND04 991 aaKnown RBP11.36□□□□□ -0.59
HDLBP-206ENST00000417540 MRPL38Q96DV4 380 aaKnown RBP11.36□□□□□ -0.59
HDLBP-206ENST00000417540 CHAMP1Q96JM3 812 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 APOL6Q9BWW8 343 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 INO80BQ9C086 356 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-206ENST00000417540 TYW1Q9NV66 732 aaKnown RBP11.36□□□□□ -0.59
HDLBP-206ENST00000417540 LRWD1Q9UFC0 647 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 KIAA1024Q9UPX6 916 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-206ENST00000417540 PCDHB7Q9Y5E2 793 aa11.36□□□□□ -0.59
HDLBP-206ENST00000417540 NPHP3-ACAD11A0A0J9YXS1 232 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 NT5C1B-RDH14C9J2C7 533 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 H3BQ06 376 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-206ENST00000417540 STAG3L1P0CL83 205 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 ARF4P18085 180 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-206ENST00000417540 LIG1P18858 919 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 POU3F3P20264 500 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-206ENST00000417540 BMPR1AP36894 532 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 DNM2P50570 870 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 FAM189BP81408 668 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 DLX2Q07687 328 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-206ENST00000417540 HYAL1Q12794 435 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 SF3A1Q15459 793 aaKnown RBP11.35□□□□□ -0.59
HDLBP-206ENST00000417540 CLUL1Q15846 466 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 TIGD5Q53EQ6 642 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 SPECC1Q5M775 1068 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 SPOUT1Q5T280 376 aaKnown RBP11.35□□□□□ -0.59
HDLBP-206ENST00000417540 PLPP4Q5VZY2 271 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 EEF1DP3Q658K8 133 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 AGMOQ6ZNB7 445 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 USP49Q70CQ1 688 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 VN1R2Q8NFZ6 395 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 POF1BQ8WVV4 589 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 SYMPKQ92797 1274 aaKnown RBP11.35□□□□□ -0.59
HDLBP-206ENST00000417540 SAMD11Q96NU1 681 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 JPH2Q9BR39 696 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-206ENST00000417540 C11orf84Q9BUA3 381 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-206ENST00000417540 VN1R3Q9BXE9 311 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 TMEM117Q9H0C3 514 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 CCDC113Q9H0I3 377 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 RNF39Q9H2S5 420 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 DNAJB4Q9UDY4 337 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 DBR1Q9UK59 544 aaKnown RBP11.35□□□□□ -0.59
HDLBP-206ENST00000417540 KIF3AQ9Y496 699 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 CNTNAP2Q9UHC6 1331 aa11.35□□□□□ -0.59
HDLBP-206ENST00000417540 WDFY4Q6ZS81 3184 aa11.34□□□□□ -0.59
HDLBP-206ENST00000417540 A0A0U1RQF3 1178 aa11.34□□□□□ -0.59
HDLBP-206ENST00000417540 GAS2O43903 313 aaKnown RBP11.34□□□□□ -0.59
HDLBP-206ENST00000417540 HIP1RO75146 1068 aa11.34□□□□□ -0.59
HDLBP-206ENST00000417540 ZC3H11AO75152 810 aaKnown RBP eCLIP11.34□□□□□ -0.59
HDLBP-206ENST00000417540 NPTXRO95502 500 aa11.34□□□□□ -0.59
HDLBP-206ENST00000417540 GLP2RO95838 553 aa11.34□□□□□ -0.59
HDLBP-206ENST00000417540 MLH1P40692 756 aa11.34□□□□□ -0.59
HDLBP-206ENST00000417540 PRPHP41219 470 aa11.34□□□□□ -0.59
HDLBP-206ENST00000417540 CEBPZQ03701 1054 aaKnown RBP11.34□□□□□ -0.59
HDLBP-206ENST00000417540 KARSQ15046 597 aaKnown RBP11.34□□□□□ -0.59
HDLBP-206ENST00000417540 PTPAQ15257 358 aa11.34□□□□□ -0.59
HDLBP-206ENST00000417540 FOXD4L6Q3SYB3 417 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms