RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 SRGAP2BP0DMP2 458 aa20.57■□□□□ 0.88
VPS16-204ENST00000417508 LAMTOR4Q0VGL1 99 aa20.57■□□□□ 0.88
VPS16-204ENST00000417508 CTTNQ14247 550 aaKnown RBP20.57■□□□□ 0.88
VPS16-204ENST00000417508 MXD4Q14582 209 aaPredicted RBP20.57■□□□□ 0.88
VPS16-204ENST00000417508 BMS1Q14692 1282 aaKnown RBP20.57■□□□□ 0.88
VPS16-204ENST00000417508 SAFBQ15424 915 aaKnown RBP eCLIP20.57■□□□□ 0.88
VPS16-204ENST00000417508 CLUL1Q15846 466 aa20.57■□□□□ 0.88
VPS16-204ENST00000417508 DUSP6Q16828 381 aa20.57■□□□□ 0.88
VPS16-204ENST00000417508 TMEM184AQ6ZMB5 413 aa20.57■□□□□ 0.88
VPS16-204ENST00000417508 SMRP1Q8NCR6 262 aa20.57■□□□□ 0.88
VPS16-204ENST00000417508 PGBD4Q96DM1 585 aa20.57■□□□□ 0.88
VPS16-204ENST00000417508 EIF2AK1Q9BQI3 630 aaKnown RBP20.57■□□□□ 0.88
VPS16-204ENST00000417508 LLPHQ9BRT6 129 aaKnown RBP20.57■□□□□ 0.88
VPS16-204ENST00000417508 TTC12Q9H892 705 aaPredicted RBP20.57■□□□□ 0.88
VPS16-204ENST00000417508 ANKEF1Q9NU02 776 aa20.57■□□□□ 0.88
VPS16-204ENST00000417508 FAM105AQ9NUU6 356 aa20.57■□□□□ 0.88
VPS16-204ENST00000417508 NEMFO60524 1076 aa20.56■□□□□ 0.88
VPS16-204ENST00000417508 JAK2O60674 1132 aa20.56■□□□□ 0.88
VPS16-204ENST00000417508 XRCC6P12956 609 aaKnown RBP eCLIP20.56■□□□□ 0.88
VPS16-204ENST00000417508 POU5F1BQ06416 359 aa20.56■□□□□ 0.88
VPS16-204ENST00000417508 EMC2Q15006 297 aa20.56■□□□□ 0.88
VPS16-204ENST00000417508 GLB1LQ6UWU2 654 aa20.56■□□□□ 0.88
VPS16-204ENST00000417508 FERMT3Q86UX7 667 aa20.56■□□□□ 0.88
VPS16-204ENST00000417508 SLC39A11Q8N1S5 342 aa20.56■□□□□ 0.88
VPS16-204ENST00000417508 TMEM143Q96AN5 459 aa20.56■□□□□ 0.88
VPS16-204ENST00000417508 ZSCAN31Q96LW9 406 aaPredicted RBP20.56■□□□□ 0.88
VPS16-204ENST00000417508 MTMR9Q96QG7 549 aa20.56■□□□□ 0.88
VPS16-204ENST00000417508 MTRQ99707 1265 aa20.56■□□□□ 0.88
VPS16-204ENST00000417508 AGPAT5Q9NUQ2 364 aa20.56■□□□□ 0.88
VPS16-204ENST00000417508 ARIH1Q9Y4X5 557 aaPredicted RBP20.56■□□□□ 0.88
VPS16-204ENST00000417508 PER2O15055 1255 aa20.55■□□□□ 0.88
VPS16-204ENST00000417508 SRGAP2CP0DJJ0 459 aa20.55■□□□□ 0.88
VPS16-204ENST00000417508 CYP4A11Q02928 519 aa20.55■□□□□ 0.88
VPS16-204ENST00000417508 TMC7Q7Z402 723 aa20.55■□□□□ 0.88
VPS16-204ENST00000417508 TCF25Q9BQ70 676 aa20.55■□□□□ 0.88
VPS16-204ENST00000417508 ENTPD7Q9NQZ7 604 aa20.55■□□□□ 0.88
VPS16-204ENST00000417508 PCDHGC5Q9Y5F6 944 aa20.55■□□□□ 0.88
VPS16-204ENST00000417508 DCXO43602 365 aa20.54■□□□□ 0.88
VPS16-204ENST00000417508 DGAT1O75907 488 aa20.54■□□□□ 0.88
VPS16-204ENST00000417508 GLP2RO95838 553 aa20.54■□□□□ 0.88
VPS16-204ENST00000417508 TXKP42681 527 aa20.54■□□□□ 0.88
VPS16-204ENST00000417508 BCAR1P56945 870 aa20.54■□□□□ 0.88
VPS16-204ENST00000417508 NCBP1Q09161 790 aaKnown RBP20.54■□□□□ 0.88
VPS16-204ENST00000417508 NOMO2Q5JPE7 1267 aa20.54■□□□□ 0.88
VPS16-204ENST00000417508 MRPL10Q7Z7H8 261 aaKnown RBP20.54■□□□□ 0.88
VPS16-204ENST00000417508 CNNM3Q8NE01 707 aa20.54■□□□□ 0.88
VPS16-204ENST00000417508 PCDHB2Q9Y5E7 798 aa20.54■□□□□ 0.88
VPS16-204ENST00000417508 ZBTB39O15060 712 aa20.53■□□□□ 0.88
VPS16-204ENST00000417508 OFD1O75665 1012 aa20.53■□□□□ 0.88
VPS16-204ENST00000417508 AXLP30530 894 aa20.53■□□□□ 0.88
VPS16-204ENST00000417508 ORC2Q13416 577 aaPredicted RBP20.53■□□□□ 0.88
VPS16-204ENST00000417508 KCNC3Q14003 757 aa20.53■□□□□ 0.88
VPS16-204ENST00000417508 TFDP1Q14186 410 aa20.53■□□□□ 0.88
VPS16-204ENST00000417508 SMC1AQ14683 1233 aaKnown RBP20.53■□□□□ 0.88
VPS16-204ENST00000417508 PLPP4Q5VZY2 271 aa20.53■□□□□ 0.88
VPS16-204ENST00000417508 MRPL43Q8N983 215 aaKnown RBP20.53■□□□□ 0.88
VPS16-204ENST00000417508 RNF149Q8NC42 400 aa20.53■□□□□ 0.88
VPS16-204ENST00000417508 TMEM169Q96HH4 297 aa20.53■□□□□ 0.88
VPS16-204ENST00000417508 C11orf16Q9NQ32 467 aa20.53■□□□□ 0.88
VPS16-204ENST00000417508 KANSL3Q9P2N6 904 aa20.53■□□□□ 0.88
VPS16-204ENST00000417508 STK39Q9UEW8 545 aa20.53■□□□□ 0.88
VPS16-204ENST00000417508 BARX2Q9UMQ3 279 aaPredicted RBP20.53■□□□□ 0.88
VPS16-204ENST00000417508 CNTNAP2Q9UHC6 1331 aa20.53■□□□□ 0.88
VPS16-204ENST00000417508 PRR33A8MZF0 331 aa20.52■□□□□ 0.88
VPS16-204ENST00000417508 HOXB8P17481 243 aaPredicted RBP20.52■□□□□ 0.88
VPS16-204ENST00000417508 HOXA11P31270 313 aaPredicted RBP20.52■□□□□ 0.88
VPS16-204ENST00000417508 PTENP60484 403 aa20.52■□□□□ 0.88
VPS16-204ENST00000417508 HMGN5P82970 282 aaKnown RBP20.52■□□□□ 0.88
VPS16-204ENST00000417508 RNASELQ05823 741 aaKnown RBP20.52■□□□□ 0.88
VPS16-204ENST00000417508 ST3GAL1Q11201 340 aa20.52■□□□□ 0.88
VPS16-204ENST00000417508 IFNLR1Q8IU57 520 aaPredicted RBP20.52■□□□□ 0.88
VPS16-204ENST00000417508 C8orf76Q96K31 380 aa20.52■□□□□ 0.88
VPS16-204ENST00000417508 FOXP1Q9H334 677 aaPredicted RBP20.52■□□□□ 0.88
VPS16-204ENST00000417508 MINDY3Q9H8M7 445 aa20.52■□□□□ 0.88
VPS16-204ENST00000417508 UBN1Q9NPG3 1134 aa20.52■□□□□ 0.88
VPS16-204ENST00000417508 SH2B1Q9NRF2 756 aaPredicted RBP20.52■□□□□ 0.88
VPS16-204ENST00000417508 TBC1D13Q9NVG8 400 aa20.52■□□□□ 0.88
VPS16-204ENST00000417508 ERLIN2O94905 339 aa20.51■□□□□ 0.87
VPS16-204ENST00000417508 PBX3P40426 434 aa20.51■□□□□ 0.87
VPS16-204ENST00000417508 GIT2Q14161 759 aa20.51■□□□□ 0.87
VPS16-204ENST00000417508 DDX53Q86TM3 631 aaKnown RBP20.51■□□□□ 0.87
VPS16-204ENST00000417508 URGCPQ8TCY9 931 aa20.51■□□□□ 0.87
VPS16-204ENST00000417508 LPPQ93052 612 aa20.51■□□□□ 0.87
VPS16-204ENST00000417508 CCDC51Q96ER9 411 aa20.51■□□□□ 0.87
VPS16-204ENST00000417508 CCDC43Q96MW1 224 aaKnown RBP20.51■□□□□ 0.87
VPS16-204ENST00000417508 PHF7Q9BWX1 381 aaPredicted RBP20.51■□□□□ 0.87
VPS16-204ENST00000417508 NRDE2Q9H7Z3 1164 aa20.51■□□□□ 0.87
VPS16-204ENST00000417508 XPNPEP1Q9NQW7 623 aa20.51■□□□□ 0.87
VPS16-204ENST00000417508 HCN4Q9Y3Q4 1203 aa20.51■□□□□ 0.87
VPS16-204ENST00000417508 USP15Q9Y4E8 981 aaPredicted RBP20.51■□□□□ 0.87
VPS16-204ENST00000417508 ARID2Q68CP9 1835 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 C2orf71A6NGG8 1288 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 HIDE1A8MVS5 230 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 ZC3H11AO75152 810 aaKnown RBP eCLIP20.5■□□□□ 0.87
VPS16-204ENST00000417508 GALTP07902 379 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 ARL2P36404 184 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 FOSBP53539 338 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 ANKRD54Q6NXT1 300 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 AGMOQ6ZNB7 445 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 CCDC83Q8IWF9 413 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms