RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 TRIM6Q9C030 488 aaPredicted RBP12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 MINDY3Q9H8M7 445 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 AGPAT5Q9NUQ2 364 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 TFIP11Q9UBB9 837 aaKnown RBP12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 CCDC39Q9UFE4 941 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 RWDD3Q9Y3V2 267 aa12.24□□□□□ -0.45
TM9SF4-203ENST00000417389 ARID2Q68CP9 1835 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 A0A0U1RQF3 1178 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 PLA2G4BP0C869 781 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 RAB27AP51159 221 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 GRIN1Q05586 938 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 GPM6BQ13491 265 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 KARSQ15046 597 aaKnown RBP12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 KCNK18Q7Z418 384 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 ZNF689Q96CS4 500 aaPredicted RBP12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 PGBD4Q96DM1 585 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 CPB2Q96IY4 423 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 DRC1Q96MC2 740 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 PNMA5Q96PV4 448 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 RUSC1Q9BVN2 902 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 CSRNP2Q9H175 543 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 C2orf40Q9H1Z8 148 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 ELAC1Q9H777 363 aaKnown RBP12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 AAASQ9NRG9 546 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 FAM105AQ9NUU6 356 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 INPP5FQ9Y2H2 1132 aa12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 MRPL42Q9Y6G3 142 aaKnown RBP12.23□□□□□ -0.45
TM9SF4-203ENST00000417389 CDH23Q9H251 3354 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 TSPAN1O60635 241 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 HIP1RO75146 1068 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 EOMESO95936 686 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 F13A1P00488 732 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 NCLP19338 710 aaKnown RBP12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 BMPR1AP36894 532 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 NAMPTP43490 491 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 PEX3P56589 373 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 RNASELQ05823 741 aaKnown RBP12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 MBTD1Q05BQ5 628 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 DMP1Q13316 513 aaPredicted RBP12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 PTPAQ15257 358 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 PCBP1Q15365 356 aaKnown RBP eCLIP12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 MAPK6Q16659 721 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 PTPROQ16827 1216 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 NOTUMQ6P988 496 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 GLB1LQ6UWU2 654 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 HACE1Q8IYU2 909 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 KRI1Q8N9T8 703 aaKnown RBP12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 HELQQ8TDG4 1101 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 LPPQ93052 612 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 CLIC6Q96NY7 704 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 C11orf84Q9BUA3 381 aaPredicted RBP12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 KIFC3Q9BVG8 833 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 APOL6Q9BWW8 343 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 TMEM117Q9H0C3 514 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 ZHX3Q9H4I2 956 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 PCDHB2Q9Y5E7 798 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 PCDHB12Q9Y5F1 795 aa12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 SRPRBQ9Y5M8 271 aaKnown RBP12.22□□□□□ -0.45
TM9SF4-203ENST00000417389 TTC3P53804 2025 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 SFI1A8K8P3 1242 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 SPTLC2O15270 562 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 B4GALT5O43286 388 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 SLC26A4O43511 780 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 PRKCBP05771 671 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 PLCG1P19174 1290 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 AXLP30530 894 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 FAM189BP81408 668 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 CACNB1Q02641 598 aaPredicted RBP12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 POU5F1BQ06416 359 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 PRPF4BQ13523 1007 aaKnown RBP12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 PKP1Q13835 747 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 SLC39A14Q15043 492 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 TMEM119Q4V9L6 283 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 HYIQ5T013 277 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 RRAGBQ5VZM2 374 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 RINT1Q6NUQ1 792 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 GPBP1Q86WP2 473 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 CDR2LQ86X02 465 aaPredicted RBP12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 THNSL1Q8IYQ7 743 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 LRRC43Q8N309 656 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 KCTD17Q8N5Z5 321 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 SLC17A8Q8NDX2 589 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 URGCPQ8TCY9 931 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 BSNDQ8WZ55 320 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 SYMPKQ92797 1274 aaKnown RBP12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 EPSTI1Q96J88 318 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 GBP3Q9H0R5 595 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 KMT5AQ9NQR1 393 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 TYW1Q9NV66 732 aaKnown RBP12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 PRMT7Q9NVM4 692 aaPredicted RBP12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 FBXO2Q9UK22 296 aaPredicted RBP12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 MTCH2Q9Y6C9 303 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 CHD9Q3L8U1 2897 aa12.21□□□□□ -0.45
TM9SF4-203ENST00000417389 NPHP3-ACAD11A0A0J9YXS1 232 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 H3BNC9 293 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 K7ERI5 159 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 TBCAO75347 108 aaKnown RBP12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 FAM13AO94988 1023 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 NPTXRO95502 500 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 RB1P06400 928 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms