RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 CEP170P1Q96L14 293 aa16.16■□□□□ 0.18
PAF1-202ENST00000416728 NAP1L4Q99733 375 aaKnown RBP16.16■□□□□ 0.18
PAF1-202ENST00000416728 INPP5FQ9Y2H2 1132 aa16.16■□□□□ 0.18
PAF1-202ENST00000416728 PPME1Q9Y570 386 aa16.16■□□□□ 0.18
PAF1-202ENST00000416728 COL4A3BPQ9Y5P4 624 aa16.16■□□□□ 0.18
PAF1-202ENST00000416728 TBX3O15119 743 aa16.15■□□□□ 0.18
PAF1-202ENST00000416728 ZNF623O75123 536 aa16.15■□□□□ 0.18
PAF1-202ENST00000416728 CXCL14O95715 111 aa16.15■□□□□ 0.18
PAF1-202ENST00000416728 NHLH1Q02575 133 aa16.15■□□□□ 0.18
PAF1-202ENST00000416728 RNASELQ05823 741 aaKnown RBP16.15■□□□□ 0.18
PAF1-202ENST00000416728 NOMO2Q5JPE7 1267 aa16.15■□□□□ 0.18
PAF1-202ENST00000416728 CES5AQ6NT32 575 aa16.15■□□□□ 0.18
PAF1-202ENST00000416728 PIK3AP1Q6ZUJ8 805 aa16.15■□□□□ 0.18
PAF1-202ENST00000416728 SUGP1Q8IWZ8 645 aaKnown RBP16.15■□□□□ 0.18
PAF1-202ENST00000416728 VPS52Q8N1B4 723 aa16.15■□□□□ 0.18
PAF1-202ENST00000416728 TMEM87AQ8NBN3 555 aa16.15■□□□□ 0.18
PAF1-202ENST00000416728 PSPC1Q8WXF1 523 aaKnown RBP16.15■□□□□ 0.18
PAF1-202ENST00000416728 IFT122Q9HBG6 1241 aa16.15■□□□□ 0.18
PAF1-202ENST00000416728 AGPAT5Q9NUQ2 364 aa16.15■□□□□ 0.18
PAF1-202ENST00000416728 TBC1D13Q9NVG8 400 aa16.15■□□□□ 0.18
PAF1-202ENST00000416728 TECTAO75443 2155 aa16.14■□□□□ 0.17
PAF1-202ENST00000416728 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.14■□□□□ 0.17
PAF1-202ENST00000416728 PFKFB2O60825 505 aa16.14■□□□□ 0.17
PAF1-202ENST00000416728 CLASP2O75122 1294 aaKnown RBP16.14■□□□□ 0.17
PAF1-202ENST00000416728 SP100P23497 879 aaPredicted RBP16.14■□□□□ 0.17
PAF1-202ENST00000416728 RFC5P40937 340 aa16.14■□□□□ 0.17
PAF1-202ENST00000416728 ITIH3Q06033 890 aa16.14■□□□□ 0.17
PAF1-202ENST00000416728 SIGLEC14Q08ET2 396 aa16.14■□□□□ 0.17
PAF1-202ENST00000416728 EPHA7Q15375 998 aa16.14■□□□□ 0.17
PAF1-202ENST00000416728 TMEM173Q86WV6 379 aaPredicted RBP16.14■□□□□ 0.17
PAF1-202ENST00000416728 ZNF579Q8NAF0 562 aaKnown RBP16.14■□□□□ 0.17
PAF1-202ENST00000416728 OXER1Q8TDS5 423 aa16.14■□□□□ 0.17
PAF1-202ENST00000416728 HAS1Q92839 578 aa16.14■□□□□ 0.17
PAF1-202ENST00000416728 PGBD4Q96DM1 585 aa16.14■□□□□ 0.17
PAF1-202ENST00000416728 LXNQ9BS40 222 aa16.14■□□□□ 0.17
PAF1-202ENST00000416728 ZBP1Q9H171 429 aa16.14■□□□□ 0.17
PAF1-202ENST00000416728 DHX33Q9H6R0 707 aaKnown RBP16.14■□□□□ 0.17
PAF1-202ENST00000416728 NRDE2Q9H7Z3 1164 aa16.14■□□□□ 0.17
PAF1-202ENST00000416728 GJB4Q9NTQ9 266 aa16.14■□□□□ 0.17
PAF1-202ENST00000416728 WRAP73Q9P2S5 460 aaPredicted RBP16.14■□□□□ 0.17
PAF1-202ENST00000416728 TPCN1Q9ULQ1 816 aa16.14■□□□□ 0.17
PAF1-202ENST00000416728 MEIS3P2A8K0S8 358 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 OFD1O75665 1012 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 GALTP07902 379 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 SRGAP2CP0DJJ0 459 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 YWHABP31946 246 aaKnown RBP16.13■□□□□ 0.17
PAF1-202ENST00000416728 PTPN21Q16825 1174 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 NCAPH2Q6IBW4 605 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 OTUD6AQ7L8S5 288 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 SRGAP1Q7Z6B7 1085 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 ZBTB33Q86T24 672 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 DDX53Q86TM3 631 aaKnown RBP16.13■□□□□ 0.17
PAF1-202ENST00000416728 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 C4orf19Q8IY42 314 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 URGCPQ8TCY9 931 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 PRPF31Q8WWY3 499 aaKnown RBP16.13■□□□□ 0.17
PAF1-202ENST00000416728 WASF1Q92558 559 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 TMEM143Q96AN5 459 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 IGSF21Q96ID5 467 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 NECTIN4Q96NY8 510 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 GBP3Q9H0R5 595 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 ADAM7Q9H2U9 754 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 TSHZ2Q9NRE2 1034 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 BMP2KQ9NSY1 1161 aaPredicted RBP16.13■□□□□ 0.17
PAF1-202ENST00000416728 ORC3Q9UBD5 711 aaPredicted RBP16.13■□□□□ 0.17
PAF1-202ENST00000416728 NR2E1Q9Y466 385 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 PCDHB2Q9Y5E7 798 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 WDR81Q562E7 1941 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 GAS2O43903 313 aaKnown RBP16.13■□□□□ 0.17
PAF1-202ENST00000416728 DTNBO60941 627 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 CTSAP10619 480 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 MRE11P49959 708 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 LAMTOR4Q0VGL1 99 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 GIT2Q14161 759 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 EMC2Q15006 297 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 ANKRD1Q15327 319 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 SLFN12Q8IYM2 578 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 FBXL6Q8N531 539 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 TCP11Q8WWU5 503 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 AUTS2Q8WXX7 1259 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 ZSWIM4Q9H7M6 989 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 BRMS1Q9HCU9 246 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 DZANK1Q9NVP4 752 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 RGL1Q9NZL6 768 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 CDH22Q9UJ99 828 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 IRAK3Q9Y616 596 aa16.13■□□□□ 0.17
PAF1-202ENST00000416728 PIEZO1Q92508 2521 aa16.12■□□□□ 0.17
PAF1-202ENST00000416728 BAG4O95429 457 aaKnown RBP16.12■□□□□ 0.17
PAF1-202ENST00000416728 MTHFRP42898 656 aa16.12■□□□□ 0.17
PAF1-202ENST00000416728 SLC11A1P49279 550 aa16.12■□□□□ 0.17
PAF1-202ENST00000416728 CYP4A11Q02928 519 aa16.12■□□□□ 0.17
PAF1-202ENST00000416728 XKR9Q5GH70 373 aa16.12■□□□□ 0.17
PAF1-202ENST00000416728 AGMOQ6ZNB7 445 aa16.12■□□□□ 0.17
PAF1-202ENST00000416728 RNF149Q8NC42 400 aa16.12■□□□□ 0.17
PAF1-202ENST00000416728 BCL7CQ8WUZ0 217 aaPredicted RBP16.12■□□□□ 0.17
PAF1-202ENST00000416728 DYDC2Q96IM9 177 aa16.12■□□□□ 0.17
PAF1-202ENST00000416728 RIPOR3Q96MK2 946 aa16.12■□□□□ 0.17
PAF1-202ENST00000416728 POMKQ9H5K3 350 aa16.12■□□□□ 0.17
PAF1-202ENST00000416728 MINDY3Q9H8M7 445 aa16.12■□□□□ 0.17
PAF1-202ENST00000416728 RSAD1Q9HA92 442 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms