RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 ANKRD54Q6NXT1 300 aa18.68■□□□□ 0.58
SF1-207ENST00000413951 LRRC55Q6ZSA7 311 aa18.68■□□□□ 0.58
SF1-207ENST00000413951 ZNF598Q86UK7 904 aaKnown RBP18.68■□□□□ 0.58
SF1-207ENST00000413951 SUSD6Q92537 303 aa18.68■□□□□ 0.58
SF1-207ENST00000413951 PGBD4Q96DM1 585 aa18.68■□□□□ 0.58
SF1-207ENST00000413951 TMEM169Q96HH4 297 aa18.68■□□□□ 0.58
SF1-207ENST00000413951 ATG2AQ2TAZ0 1938 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 GAS2O43903 313 aaKnown RBP18.67■□□□□ 0.58
SF1-207ENST00000413951 U2AF2P26368 475 aaKnown RBP eCLIP18.67■□□□□ 0.584e-8■■■■■ 44.5
SF1-207ENST00000413951 PHKA2P46019 1235 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 PPP2R5CQ13362 524 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 SAFBQ15424 915 aaKnown RBP eCLIP18.67■□□□□ 0.58
SF1-207ENST00000413951 LETM2Q2VYF4 491 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 LARP1BQ659C4 914 aaKnown RBP18.67■□□□□ 0.58
SF1-207ENST00000413951 CES5AQ6NT32 575 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 GLB1LQ6UWU2 654 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 NEK8Q86SG6 692 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 RHPN2Q8IUC4 686 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 SLC39A11Q8N1S5 342 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 MRPL43Q8N983 215 aaKnown RBP18.67■□□□□ 0.58
SF1-207ENST00000413951 HELQQ8TDG4 1101 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 RPGRIP1Q96KN7 1286 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 NECTIN4Q96NY8 510 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 RNF19AQ9NV58 838 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 NR2E1Q9Y466 385 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 PCDHGC5Q9Y5F6 944 aa18.67■□□□□ 0.58
SF1-207ENST00000413951 A0A087WZ62 844 aa18.66■□□□□ 0.58
SF1-207ENST00000413951 BAG4O95429 457 aaKnown RBP18.66■□□□□ 0.58
SF1-207ENST00000413951 P4HBP07237 508 aaKnown RBP18.66■□□□□ 0.58
SF1-207ENST00000413951 RFC5P40937 340 aa18.66■□□□□ 0.58
SF1-207ENST00000413951 ITIH3Q06033 890 aa18.66■□□□□ 0.58
SF1-207ENST00000413951 KCNC3Q14003 757 aa18.66■□□□□ 0.58
SF1-207ENST00000413951 INF2Q27J81 1249 aa18.66■□□□□ 0.58
SF1-207ENST00000413951 CLLU1OSQ5K130 101 aa18.66■□□□□ 0.58
SF1-207ENST00000413951 TRIM67Q6ZTA4 783 aa18.66■□□□□ 0.58
SF1-207ENST00000413951 HFE2Q6ZVN8 426 aa18.66■□□□□ 0.58
SF1-207ENST00000413951 OTUD6AQ7L8S5 288 aa18.66■□□□□ 0.58
SF1-207ENST00000413951 CATSPER4Q7RTX7 472 aa18.66■□□□□ 0.58
SF1-207ENST00000413951 SUGP1Q8IWZ8 645 aaKnown RBP18.66■□□□□ 0.58
SF1-207ENST00000413951 ZNF668Q96K58 619 aaPredicted RBP18.66■□□□□ 0.58
SF1-207ENST00000413951 FDXACB1Q9BRP7 624 aaPredicted RBP18.66■□□□□ 0.58
SF1-207ENST00000413951 CYP26B1Q9NR63 512 aa18.66■□□□□ 0.58
SF1-207ENST00000413951 HCSTQ9UBK5 93 aa18.66■□□□□ 0.58
SF1-207ENST00000413951 PIN4Q9Y237 131 aaKnown RBP18.66■□□□□ 0.58
SF1-207ENST00000413951 FAM205CA6NFA0 338 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 ASAP2O43150 1006 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 ZNF623O75123 536 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 STBD1O95210 358 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 SYT1P21579 422 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 POLGP54098 1239 aaPredicted RBP18.65■□□□□ 0.58
SF1-207ENST00000413951 BCAR1P56945 870 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 ZXDAP98168 799 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 PCBP1Q15365 356 aaKnown RBP eCLIP18.65■□□□□ 0.581e-8■■■□□ 15.5
SF1-207ENST00000413951 PIK3AP1Q6ZUJ8 805 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 NOSTRINQ8IVI9 506 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 SLFN12Q8IYM2 578 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 TCP11Q8WWU5 503 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 GJA10Q969M2 543 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 CEP89Q96ST8 783 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 FOXD4L1Q9NU39 408 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 FAM105AQ9NUU6 356 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 PLXNA4Q9HCM2 1894 aa18.65■□□□□ 0.58
SF1-207ENST00000413951 TMEM221A6NGB7 291 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 HIDE1A8MVS5 230 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 M0R296 226 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 HSP90AA1P07900 732 aaKnown RBP18.64■□□□□ 0.57
SF1-207ENST00000413951 FGFR4P22455 802 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 RNASELQ05823 741 aaKnown RBP18.64■□□□□ 0.57
SF1-207ENST00000413951 SIGLEC14Q08ET2 396 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 DRP2Q13474 957 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 ANO5Q75V66 913 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 SRGAP1Q7Z6B7 1085 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 VN1R2Q8NFZ6 395 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 URGCPQ8TCY9 931 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 PSPC1Q8WXF1 523 aaKnown RBP18.64■□□□□ 0.57
SF1-207ENST00000413951 PBXIP1Q96AQ6 731 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 CEP170P1Q96L14 293 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 NLRP4Q96MN2 994 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 S1PR5Q9H228 398 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 KCNMB3Q9NPA1 279 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 DZANK1Q9NVP4 752 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 KANSL3Q9P2N6 904 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 COL4A3BPQ9Y5P4 624 aa18.64■□□□□ 0.57
SF1-207ENST00000413951 C2orf71A6NGG8 1288 aa18.63■□□□□ 0.57
SF1-207ENST00000413951 H3BQV1 296 aa18.63■□□□□ 0.57
SF1-207ENST00000413951 CCNT1O60563 726 aaKnown RBP18.63■□□□□ 0.57
SF1-207ENST00000413951 CA8P35219 290 aa18.63■□□□□ 0.57
SF1-207ENST00000413951 NCBP1Q09161 790 aaKnown RBP18.63■□□□□ 0.57
SF1-207ENST00000413951 EPHA7Q15375 998 aa18.63■□□□□ 0.57
SF1-207ENST00000413951 NOMO2Q5JPE7 1267 aa18.63■□□□□ 0.57
SF1-207ENST00000413951 LLGL2Q6P1M3 1020 aa18.63■□□□□ 0.57
SF1-207ENST00000413951 PPFIBP1Q86W92 1011 aa18.63■□□□□ 0.57
SF1-207ENST00000413951 C4orf19Q8IY42 314 aa18.63■□□□□ 0.57
SF1-207ENST00000413951 CNNM3Q8NE01 707 aa18.63■□□□□ 0.57
SF1-207ENST00000413951 RIPOR3Q96MK2 946 aa18.63■□□□□ 0.57
SF1-207ENST00000413951 UBN1Q9NPG3 1134 aa18.63■□□□□ 0.57
SF1-207ENST00000413951 IRAK3Q9Y616 596 aa18.63■□□□□ 0.57
SF1-207ENST00000413951 SLC37A4O43826 429 aa18.62■□□□□ 0.57
SF1-207ENST00000413951 ZC3H11AO75152 810 aaKnown RBP eCLIP18.62■□□□□ 0.57
SF1-207ENST00000413951 CSDE1O75534 798 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms