RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ATP8A1Q9Y2Q0 1164 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 ZBBXA8MT70 800 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 MT-ND3P03897 115 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 PAMP19021 973 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 STX1BP61266 288 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 TAP1Q03518 808 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 GLE1Q53GS7 698 aaKnown RBP18.48■□□□□ 0.55
PHRF1-202ENST00000413872 RNF10Q8N5U6 811 aaKnown RBP18.48■□□□□ 0.55
PHRF1-202ENST00000413872 GPRC5AQ8NFJ5 357 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 PGBD4Q96DM1 585 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 KBTBD13C9JR72 458 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 KRT7P08729 469 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 DHX9Q08211 1270 aaKnown RBP18.48■□□□□ 0.55
PHRF1-202ENST00000413872 SUCLA2Q9P2R7 463 aaPredicted RBP18.48■□□□□ 0.55
PHRF1-202ENST00000413872 LRRC53A6NM62 1247 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 GNA15P30679 374 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 HSPH1Q92598 858 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 TMEM106CQ9BVX2 250 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 SMYD2Q9NRG4 433 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 HPCAL4Q9UM19 191 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 POLIQ9UNA4 740 aa18.48■□□□□ 0.55
PHRF1-202ENST00000413872 DPYSL4O14531 572 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 SUN1O94901 812 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 GYS1P13807 737 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 VEPH1Q14D04 833 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 EZH2Q15910 746 aaKnown RBP18.47■□□□□ 0.55
PHRF1-202ENST00000413872 KIF12Q96FN5 646 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 TTC25Q96NG3 672 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 FMO2Q99518 471 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 FBXO2Q9UK22 296 aaPredicted RBP18.47■□□□□ 0.55
PHRF1-202ENST00000413872 BAG5Q9UL15 447 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 CCDC151A5D8V7 595 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 M0QYV0 167 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 ATP1A2P50993 1020 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 TSTA3Q13630 321 aaPredicted RBP18.47■□□□□ 0.55
PHRF1-202ENST00000413872 PPP6R3Q5H9R7 873 aaPredicted RBP18.47■□□□□ 0.55
PHRF1-202ENST00000413872 SHC4Q6S5L8 630 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 SCFD2Q8WU76 684 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 MTFR1LQ9H019 292 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 CCL15-CCL14A0A0B4J2E2 113 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 PP2D1A8MPX8 630 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 SEPT6Q14141 434 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 STILQ15468 1287 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 CCL15Q16663 113 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 PCGF5Q86SE9 256 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 SCYL3Q8IZE3 742 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 RDM1Q8NG50 284 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 CYP26B1Q9NR63 512 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 TTI1O43156 1089 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 CXCR5P32302 372 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 DRAP1Q14919 205 aaPredicted RBP18.47■□□□□ 0.55
PHRF1-202ENST00000413872 CYFIP1Q7L576 1253 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 SRRM1Q8IYB3 904 aaKnown RBP18.47■□□□□ 0.55
PHRF1-202ENST00000413872 FAM217BQ9NTX9 383 aaPredicted RBP18.47■□□□□ 0.55
PHRF1-202ENST00000413872 IP6K2Q9UHH9 426 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 LRRIQ1Q96JM4 1722 aa18.47■□□□□ 0.55
PHRF1-202ENST00000413872 KIF28PB7ZC32 967 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 CASP1P29466 404 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 PMLP29590 882 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 PTPN21Q16825 1174 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 BBS9Q3SYG4 887 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 PHLDB3Q6NSJ2 640 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 ARHGAP42A6NI28 874 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 A8MXQ7 604 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 CASQ2O14958 399 aaPredicted RBP18.46■□□□□ 0.55
PHRF1-202ENST00000413872 IER5Q5VY09 327 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 TRIM9Q9C026 710 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 GUCY1A2P33402 732 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 SAAL1Q96ER3 474 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 C11orf70Q9BRQ4 267 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 CNOT10Q9H9A5 744 aaKnown RBP18.46■□□□□ 0.55
PHRF1-202ENST00000413872 EPB41L4AQ9HCS5 686 aaPredicted RBP18.46■□□□□ 0.55
PHRF1-202ENST00000413872 ITSN1Q15811 1721 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 EVI5O60447 810 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 FGGP02679 453 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.46■□□□□ 0.55
PHRF1-202ENST00000413872 PARD3BQ8TEW8 1205 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 PYROXD1Q8WU10 500 aa18.46■□□□□ 0.55
PHRF1-202ENST00000413872 NNMTP40261 264 aa18.46■□□□□ 0.54
PHRF1-202ENST00000413872 HUNKP57058 714 aa18.46■□□□□ 0.54
PHRF1-202ENST00000413872 SNRPFP62306 86 aaKnown RBP18.45■□□□□ 0.54
PHRF1-202ENST00000413872 CAV1Q03135 178 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 C2orf54Q08AI8 447 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 JADE1Q6IE81 842 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 SAMD3Q8N6K7 520 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 GDAP1Q8TB36 358 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 IQANK1A0A1B0GTG1 560 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 EXOC1LA0A1B0GW35 172 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 DYNC1LI2O43237 492 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-202ENST00000413872 PRR29P0C7W0 189 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 PSMC1P62191 440 aaKnown RBP18.45■□□□□ 0.54
PHRF1-202ENST00000413872 KLC3Q6P597 504 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 MMEL1Q495T6 779 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 MCUQ8NE86 351 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 C7orf25Q9BPX7 421 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 ZMYND12Q9H0C1 365 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 EMSYQ7Z589 1322 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 PPP2R3CQ969Q6 453 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 MXRA8Q9BRK3 442 aa18.45■□□□□ 0.54
PHRF1-202ENST00000413872 TMEM39BQ9GZU3 492 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms