RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ASTLQ6HA08 431 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-210ENST00000413578 FDXACB1Q9BRP7 624 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-210ENST00000413578 SH3GLB2Q9NR46 395 aa13.69□□□□□ -0.22
LIMS2-210ENST00000413578 VPS54Q9P1Q0 977 aa13.69□□□□□ -0.22
LIMS2-210ENST00000413578 LIMD1Q9UGP4 676 aa13.69□□□□□ -0.22
LIMS2-210ENST00000413578 NAP1L2Q9ULW6 460 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-210ENST00000413578 FAM186AA6NE01 2351 aa13.69□□□□□ -0.22
LIMS2-210ENST00000413578 M0R2N6 131 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 LILRB3O75022 631 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 MAFO75444 373 aaPredicted RBP13.68□□□□□ -0.22
LIMS2-210ENST00000413578 SKIP12755 728 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 SLC11A1P49279 550 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 RAB27AP51159 221 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 CLCN5P51795 746 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 NPY5RQ15761 445 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 MTERF2Q49AM1 385 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 GLB1LQ6UWU2 654 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 ANO5Q75V66 913 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 MIER3Q7Z3K6 550 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 GPR149Q86SP6 731 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 ZNF280BQ86YH2 543 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 ETNPPLQ8TBG4 499 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 TBCKQ8TEA7 893 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 SH2D3AQ9BRG2 576 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 IFT122Q9HBG6 1241 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 FAM105AQ9NUU6 356 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 DNAJB4Q9UDY4 337 aa13.68□□□□□ -0.22
LIMS2-210ENST00000413578 SEPT9Q9UHD8 586 aaPredicted RBP13.68□□□□□ -0.22
LIMS2-210ENST00000413578 PIN4Q9Y237 131 aaKnown RBP13.68□□□□□ -0.22
LIMS2-210ENST00000413578 MYH9P35579 1960 aaKnown RBP13.67□□□□□ -0.22
LIMS2-210ENST00000413578 TDP2O95551 362 aa13.67□□□□□ -0.22
LIMS2-210ENST00000413578 NPR3P17342 541 aa13.67□□□□□ -0.22
LIMS2-210ENST00000413578 HSPA4P34932 840 aa13.67□□□□□ -0.22
LIMS2-210ENST00000413578 CLCN4P51793 760 aa13.67□□□□□ -0.22
LIMS2-210ENST00000413578 TWF2Q6IBS0 349 aaKnown RBP13.67□□□□□ -0.22
LIMS2-210ENST00000413578 MOXD1Q6UVY6 613 aa13.67□□□□□ -0.22
LIMS2-210ENST00000413578 TMC5Q6UXY8 1006 aa13.67□□□□□ -0.22
LIMS2-210ENST00000413578 AGMOQ6ZNB7 445 aa13.67□□□□□ -0.22
LIMS2-210ENST00000413578 KLHL5Q96PQ7 755 aa13.67□□□□□ -0.22
LIMS2-210ENST00000413578 SLC26A6Q9BXS9 759 aa13.67□□□□□ -0.22
LIMS2-210ENST00000413578 INO80BQ9C086 356 aaPredicted RBP13.67□□□□□ -0.22
LIMS2-210ENST00000413578 SFXN1Q9H9B4 322 aa13.67□□□□□ -0.22
LIMS2-210ENST00000413578 CYP26B1Q9NR63 512 aa13.67□□□□□ -0.22
LIMS2-210ENST00000413578 SUCLA2Q9P2R7 463 aaPredicted RBP13.67□□□□□ -0.22
LIMS2-210ENST00000413578 DBR1Q9UK59 544 aaKnown RBP13.67□□□□□ -0.22
LIMS2-210ENST00000413578 SNX14Q9Y5W7 946 aa13.67□□□□□ -0.22
LIMS2-210ENST00000413578 CDC45O75419 566 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 DDHD2O94830 711 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 EFEMP2O95967 443 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 RPS6KB1P23443 525 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 PDIA3P30101 505 aaKnown RBP13.66□□□□□ -0.22
LIMS2-210ENST00000413578 HOXA11P31270 313 aaPredicted RBP13.66□□□□□ -0.22
LIMS2-210ENST00000413578 CA8P35219 290 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 DNM2P50570 870 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 AFF1P51825 1210 aaKnown RBP13.66□□□□□ -0.22
LIMS2-210ENST00000413578 FGD1P98174 961 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 AKAP17AQ02040 695 aaKnown RBP13.66□□□□□ -0.22
LIMS2-210ENST00000413578 LONRF3Q496Y0 759 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 C15orf39Q6ZRI6 1047 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 MRPL10Q7Z7H8 261 aaKnown RBP13.66□□□□□ -0.22
LIMS2-210ENST00000413578 CABP7Q86V35 215 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 PPFIBP1Q86W92 1011 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 RHPN2Q8IUC4 686 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 KSR1Q8IVT5 923 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 DAGLBQ8NCG7 672 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 JAKMIP1Q96N16 626 aaKnown RBP13.66□□□□□ -0.22
LIMS2-210ENST00000413578 C22orf23Q9BZE7 217 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 AGPAT5Q9NUQ2 364 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 STK39Q9UEW8 545 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 PCDHA4Q9UN74 947 aa13.66□□□□□ -0.22
LIMS2-210ENST00000413578 PAPLNO95428 1278 aa13.65□□□□□ -0.22
LIMS2-210ENST00000413578 CNPP09543 421 aaKnown RBP13.65□□□□□ -0.22
LIMS2-210ENST00000413578 AOC1P19801 751 aa13.65□□□□□ -0.22
LIMS2-210ENST00000413578 UBXN11Q5T124 520 aa13.65□□□□□ -0.22
LIMS2-210ENST00000413578 BLOC1S2Q6QNY1 142 aa13.65□□□□□ -0.22
LIMS2-210ENST00000413578 CCDC149Q6ZUS6 474 aa13.65□□□□□ -0.22
LIMS2-210ENST00000413578 OTOP3Q7RTS5 596 aa13.65□□□□□ -0.22
LIMS2-210ENST00000413578 CATSPER4Q7RTX7 472 aa13.65□□□□□ -0.22
LIMS2-210ENST00000413578 RNF168Q8IYW5 571 aaPredicted RBP13.65□□□□□ -0.22
LIMS2-210ENST00000413578 CMASQ8NFW8 434 aaPredicted RBP13.65□□□□□ -0.22
LIMS2-210ENST00000413578 NLRP4Q96MN2 994 aa13.65□□□□□ -0.22
LIMS2-210ENST00000413578 TMEM175Q9BSA9 504 aa13.65□□□□□ -0.22
LIMS2-210ENST00000413578 NCOA5Q9HCD5 579 aaKnown RBP13.65□□□□□ -0.22
LIMS2-210ENST00000413578 DUSP12Q9UNI6 340 aa13.65□□□□□ -0.22
LIMS2-210ENST00000413578 INPP5FQ9Y2H2 1132 aa13.65□□□□□ -0.22
LIMS2-210ENST00000413578 PCDHB2Q9Y5E7 798 aa13.65□□□□□ -0.22
LIMS2-210ENST00000413578 DENND4AQ7Z401 1863 aa13.65□□□□□ -0.22
LIMS2-210ENST00000413578 MYO10Q9HD67 2058 aa13.65□□□□□ -0.22
LIMS2-210ENST00000413578 VPS13AQ96RL7 3174 aa13.65□□□□□ -0.23
LIMS2-210ENST00000413578 EML1O00423 815 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 INPPL1O15357 1258 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 PI15O43692 258 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 N4BP1O75113 896 aaKnown RBP13.64□□□□□ -0.23
LIMS2-210ENST00000413578 NLRP5P59047 1200 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 PSMC5P62195 406 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 FOXK2Q01167 660 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 RNASELQ05823 741 aaKnown RBP13.64□□□□□ -0.23
LIMS2-210ENST00000413578 PLA2G4FQ68DD2 849 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 FRMD5Q7Z6J6 570 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms