RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 USP40Q9NVE5 1235 aa9.63□□□□□ -0.87
SIK3-202ENST00000413553 MTRF1LQ9UGC7 380 aaKnown RBP9.63□□□□□ -0.87
SIK3-202ENST00000413553 AJAP1Q9UKB5 411 aaPredicted RBP9.63□□□□□ -0.87
SIK3-202ENST00000413553 PPP1R9AQ9ULJ8 1098 aa9.63□□□□□ -0.87
SIK3-202ENST00000413553 USP15Q9Y4E8 981 aaPredicted RBP9.63□□□□□ -0.87
SIK3-202ENST00000413553 A0A0A6YYK5 440 aaPredicted RBP9.62□□□□□ -0.87
SIK3-202ENST00000413553 POTEB3A0JP26 581 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 ENO4A6NNW6 628 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 POTECB2RU33 542 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 TCP11X1B4DZS4 312 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 RASGRF2O14827 1237 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 SUN1O94901 812 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 PLA2G4BP0C869 781 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 CCND1P24385 295 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 ATP11AP98196 1134 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 KLRC3Q07444 240 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 GRIK3Q13003 919 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 POTEBQ6S5H4 581 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 GLYCTKQ8IVS8 523 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 KCNV2Q8TDN2 545 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 ZNF483Q8TF39 744 aaPredicted RBP9.62□□□□□ -0.87
SIK3-202ENST00000413553 C18orf8Q96DM3 657 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 FAM163AQ96GL9 167 aaPredicted RBP9.62□□□□□ -0.87
SIK3-202ENST00000413553 YIPF3Q9GZM5 350 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 TMOD4Q9NZQ9 345 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 DDX25Q9UHL0 483 aaKnown RBP9.62□□□□□ -0.87
SIK3-202ENST00000413553 PCDHA12Q9UN75 941 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 RPTORQ8N122 1335 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 RASA1P20936 1047 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 PRKCIP41743 596 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 ZNF131P52739 623 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 COPS2P61201 443 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 TGFB2P61812 414 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 DALRD3Q5D0E6 543 aaKnown RBP9.62□□□□□ -0.87
SIK3-202ENST00000413553 ANKRD42Q8N9B4 389 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 IFT74Q96LB3 600 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 NT5C3AQ9H0P0 336 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 PNMA3Q9UL41 463 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 BCS1LQ9Y276 419 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 NAV1Q8NEY1 1877 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 KDM3AQ9Y4C1 1321 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 EME2A4GXA9 379 aaPredicted RBP9.62□□□□□ -0.87
SIK3-202ENST00000413553 FAM187AA6NFU0 413 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 KIAA0391O15091 583 aaKnown RBP9.62□□□□□ -0.87
SIK3-202ENST00000413553 EVI5O60447 810 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 RAD17O75943 681 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 ATP2A2P16615 1042 aaKnown RBP9.62□□□□□ -0.87
SIK3-202ENST00000413553 MSH2P43246 934 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 CASP5P51878 434 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 MAPK7Q13164 816 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 DHX34Q14147 1143 aaKnown RBP9.62□□□□□ -0.87
SIK3-202ENST00000413553 CNGA2Q16280 664 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 PPP2R5EQ16537 467 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 EDRF1Q3B7T1 1238 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 GRIPAP1Q4V328 841 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 AADACL2Q6P093 401 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 ZDHHC24Q6UX98 284 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 PPP4R3CPQ6ZMV5 832 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 RFFLQ8WZ73 363 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 KCNK9Q9NPC2 374 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 HOMER3Q9NSC5 361 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 TRIM33Q9UPN9 1127 aa9.62□□□□□ -0.87
SIK3-202ENST00000413553 MAST2Q6P0Q8 1798 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 LRRC37AA6NMS7 1700 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 C10orf71Q711Q0 1435 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 IGSF9BQ9UPX0 1349 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 USP17L5A8MUK1 530 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 DDX3YO15523 660 aaKnown RBP9.61□□□□□ -0.87
SIK3-202ENST00000413553 SMNDC1O75940 238 aaKnown RBP eCLIP9.61□□□□□ -0.87
SIK3-202ENST00000413553 ALADP13716 330 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 STAT1P42224 750 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 CRKP46108 304 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 TAF11Q15544 211 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 TRIM68Q6AZZ1 485 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 MAEAQ7L5Y9 396 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 CROCCP2Q86T23 111 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 LNX1Q8TBB1 728 aaPredicted RBP9.61□□□□□ -0.87
SIK3-202ENST00000413553 CARD9Q9H257 536 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 PCDHA2Q9Y5H9 948 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 ESYT2A0FGR8 921 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 TMEM110-MUSTN1A8MSY1 372 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 FERP16591 822 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 KCNA3P22001 575 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 RPL21P46778 160 aaKnown RBP9.61□□□□□ -0.87
SIK3-202ENST00000413553 NPEPPSP55786 919 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 LONRF1Q17RB8 773 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 ANKRD20A2Q5SQ80 823 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 ANKRD20A1Q5TYW2 823 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 ANKRD20A3Q5VUR7 823 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 MIS18BP1Q6P0N0 1132 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 FRMD5Q7Z6J6 570 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 OGFOD1Q8N543 542 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 GBP7Q8N8V2 638 aaPredicted RBP9.61□□□□□ -0.87
SIK3-202ENST00000413553 GDAP1Q8TB36 358 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 UPF1Q92900 1129 aaKnown RBP eCLIP9.61□□□□□ -0.87
SIK3-202ENST00000413553 CCDC134Q9H6E4 229 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 KCNMB3Q9NPA1 279 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 SLC5A4Q9NY91 659 aa9.61□□□□□ -0.87
SIK3-202ENST00000413553 TTC7AQ9ULT0 858 aaPredicted RBP9.61□□□□□ -0.87
SIK3-202ENST00000413553 PTPN22Q9Y2R2 807 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms