RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 BCRP11274 1271 aa20.56■□□□□ 0.88
TNFRSF8-202ENST00000413146 COPB2P35606 906 aa20.56■□□□□ 0.88
TNFRSF8-202ENST00000413146 STAT2P52630 851 aa20.56■□□□□ 0.88
TNFRSF8-202ENST00000413146 DRP2Q13474 957 aa20.56■□□□□ 0.88
TNFRSF8-202ENST00000413146 CCDC121Q6ZUS5 278 aa20.56■□□□□ 0.88
TNFRSF8-202ENST00000413146 PALB2Q86YC2 1186 aa20.56■□□□□ 0.88
TNFRSF8-202ENST00000413146 AGPAT1Q99943 283 aa20.56■□□□□ 0.88
TNFRSF8-202ENST00000413146 VCPKMTQ9H867 229 aa20.56■□□□□ 0.88
TNFRSF8-202ENST00000413146 GOPCQ9HD26 462 aa20.56■□□□□ 0.88
TNFRSF8-202ENST00000413146 ERVK-5Q9HDB9 667 aa20.56■□□□□ 0.88
TNFRSF8-202ENST00000413146 RASAL2Q9UJF2 1139 aa20.56■□□□□ 0.88
TNFRSF8-202ENST00000413146 SLX4Q8IY92 1834 aa20.55■□□□□ 0.88
TNFRSF8-202ENST00000413146 LOXHD1Q8IVV2 1947 aa20.55■□□□□ 0.88
TNFRSF8-202ENST00000413146 ACTN3Q08043 901 aaPredicted RBP20.55■□□□□ 0.88
TNFRSF8-202ENST00000413146 PHLDB3Q6NSJ2 640 aa20.55■□□□□ 0.88
TNFRSF8-202ENST00000413146 CEP89Q96ST8 783 aa20.55■□□□□ 0.88
TNFRSF8-202ENST00000413146 TXLNGYQ9BZA5 131 aa20.55■□□□□ 0.88
TNFRSF8-202ENST00000413146 CNOT10Q9H9A5 744 aaKnown RBP20.55■□□□□ 0.88
TNFRSF8-202ENST00000413146 DDX20Q9UHI6 824 aaKnown RBP20.55■□□□□ 0.88
TNFRSF8-202ENST00000413146 COG5Q9UP83 839 aa20.55■□□□□ 0.88
TNFRSF8-202ENST00000413146 SYNGAP1Q96PV0 1343 aa20.55■□□□□ 0.88
TNFRSF8-202ENST00000413146 POLR2MP0CAP2 368 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 KRT13P13646 458 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 JAG1P78504 1218 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 SETQ01105 290 aaPredicted RBP20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 PLCB4Q15147 1175 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 STRIP1Q5VSL9 837 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 ARMC9Q7Z3E5 817 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 RDH13Q8NBN7 331 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 RAPGEF5Q92565 580 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 HOOK2Q96ED9 719 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 WDR11Q9BZH6 1224 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 EHMT1Q9H9B1 1298 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 ZDHHC18Q9NUE0 388 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 TMOD4Q9NZQ9 345 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 A0A1W2PRG0 241 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 FOXN3O00409 490 aaPredicted RBP20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 TRIM37O94972 964 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 MNAT1P51948 309 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 UBXN2AP68543 259 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 PDE4CQ08493 712 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 JAMLQ86YT9 394 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 SLC9A9Q8IVB4 645 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 TEX2Q8IWB9 1127 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 ALG3Q92685 438 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 GLG1Q92896 1179 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 CTTNBP2NLQ9P2B4 639 aa20.54■□□□□ 0.88
TNFRSF8-202ENST00000413146 ARHGEF35A5YM69 484 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 MIF4GDA9UHW6 222 aaKnown RBP20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 VCAM1P19320 739 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 HADHBP55084 474 aaKnown RBP20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 MAPK7Q13164 816 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 QPCTQ16769 361 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 KIAA1755Q5JYT7 1200 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 UBL4BQ8N7F7 174 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 NEK9Q8TD19 979 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 TLCD1Q96CP7 247 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 ZNF577Q9BSK1 485 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 WRAP73Q9P2S5 460 aaPredicted RBP20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 PFASO15067 1338 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 HSPA6P17066 643 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 PMS2P54278 862 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 FKBP1AP62942 108 aaKnown RBP20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 CETN1Q12798 172 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 DACT2Q5SW24 774 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 C11orf63Q6NUN7 778 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 CCDC13Q8IYE1 715 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 CACNA2D3Q8IZS8 1091 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 BANK1Q8NDB2 785 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 UNC45AQ9H3U1 944 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 ALG6Q9Y672 507 aa20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 COL11A2P13942 1736 aaPredicted RBP20.53■□□□□ 0.88
TNFRSF8-202ENST00000413146 PLTPP55058 493 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 CEP55Q53EZ4 464 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 DENND2CQ68D51 928 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 CCDC174Q6PII3 467 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 IPO4Q8TEX9 1081 aaKnown RBP20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 SLC20A1Q8WUM9 679 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 SEC16BQ96JE7 1060 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 LXNQ9BS40 222 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 PABPC3Q9H361 631 aaKnown RBP20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 ACTR5Q9H9F9 607 aaPredicted RBP20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 LRRC4CQ9HCJ2 640 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 UBE2TQ9NPD8 197 aaPredicted RBP20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 SCN9AQ15858 1988 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 ATRNL1Q5VV63 1379 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 GOLGA6L7A0A1B0GV03 622 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 C5orf60A6NFR6 353 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 K7ENM7 598 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 HIP1RO75146 1068 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 PHF2O75151 1096 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 NUDT17P0C025 328 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 LMO3Q8TAP4 145 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 TEKT3Q9BXF9 490 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 SERPINA10Q9UK55 444 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 SYNPO2Q9UMS6 1093 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 SNX24Q9Y343 169 aa20.52■□□□□ 0.88
TNFRSF8-202ENST00000413146 EMSYQ7Z589 1322 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 CAND2O75155 1236 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms