RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 KATNAL1Q9BW62 490 aa7.3□□□□□ -1.24
VPS41-204ENST00000413141 SUGCTQ9HAC7 445 aa7.3□□□□□ -1.24
VPS41-204ENST00000413141 RTN4Q9NQC3 1192 aaKnown RBP7.3□□□□□ -1.24
VPS41-204ENST00000413141 CGNQ9P2M7 1197 aaKnown RBP7.3□□□□□ -1.24
VPS41-204ENST00000413141 KCNG1Q9UIX4 513 aa7.3□□□□□ -1.24
VPS41-204ENST00000413141 EXOC7Q9UPT5 735 aa7.3□□□□□ -1.24
VPS41-204ENST00000413141 GOLGA6L6A8MZA4 724 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 TISP43B9A030 160 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 HNRNPDLO14979 420 aaKnown RBP7.29□□□□□ -1.24
VPS41-204ENST00000413141 N4BP3O15049 544 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 CLIC2O15247 247 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 MAGEB2O15479 319 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 TEX33O43247 280 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 ADAMTS4O75173 837 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 AKAP3O75969 853 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 PGK1P00558 417 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 PIGRP01833 764 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 INHAP05111 366 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 PTMAP06454 111 aaKnown RBP7.29□□□□□ -1.24
VPS41-204ENST00000413141 TPM2P07951 284 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 SMIM10L2AP0DMW4 78 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 SMIM10L2BP0DMW5 78 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 PRKCSHP14314 528 aaPredicted RBP7.29□□□□□ -1.24
VPS41-204ENST00000413141 KLRC1P26715 233 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 CST5P28325 142 aaPredicted RBP7.29□□□□□ -1.24
VPS41-204ENST00000413141 HOXC8P31273 242 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 PBX1P40424 430 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 MTIF2P46199 727 aaKnown RBP7.29□□□□□ -1.24
VPS41-204ENST00000413141 PSEN2P49810 448 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 VASPP50552 380 aaPredicted RBP7.29□□□□□ -1.24
VPS41-204ENST00000413141 SNRPFP62306 86 aaKnown RBP7.29□□□□□ -1.24
VPS41-204ENST00000413141 LAMTOR4Q0VGL1 99 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 MYBPC2Q14324 1141 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 MXD4Q14582 209 aaPredicted RBP7.29□□□□□ -1.24
VPS41-204ENST00000413141 ARHGEF6Q15052 776 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 MAN2A1Q16706 1144 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 PTPN21Q16825 1174 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 CCDC40Q4G0X9 1142 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 EFCAB12Q6NXP0 572 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 MTHFD1LQ6UB35 978 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 TMC6Q7Z403 805 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 RHPN2Q8IUC4 686 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 CREBRFQ8IUR6 639 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 SLC9A9Q8IVB4 645 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 DRC7Q8IY82 874 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 METTL13Q8N6R0 699 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 NOC4LQ9BVI4 516 aaKnown RBP7.29□□□□□ -1.24
VPS41-204ENST00000413141 CCDC113Q9H0I3 377 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 VPS16Q9H269 839 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 SPC25Q9HBM1 224 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 XPNPEP3Q9NQH7 507 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 DMAC2Q9NW81 257 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 SUCLA2Q9P2R7 463 aaPredicted RBP7.29□□□□□ -1.24
VPS41-204ENST00000413141 IMPACTQ9P2X3 320 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 TSKSQ9UJT2 592 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 PTCH2Q9Y6C5 1203 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 HTTP42858 3142 aa7.29□□□□□ -1.24
VPS41-204ENST00000413141 ITIH6Q6UXX5 1313 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 NRCAMQ92823 1304 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 SCN10AQ9Y5Y9 1956 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 A0A1W2PQC6 194 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 MBLAC1A4D2B0 266 aaPredicted RBP7.28□□□□□ -1.24
VPS41-204ENST00000413141 RRN3P2A6NIE6 340 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 KPNA6O60684 536 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 EDN1P05305 212 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 GJB1P08034 283 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 EPB41P11171 864 aaKnown RBP7.28□□□□□ -1.24
VPS41-204ENST00000413141 TMOD1P28289 359 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 GRK4P32298 578 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 CASP4P49662 377 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 DNM2P50570 870 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 CYP2J2P51589 502 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 EFNA5P52803 228 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 C1QTNF8P60827 252 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 STRN3Q13033 797 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 TFDP1Q14186 410 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 VWA3BQ502W6 1294 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 HS1BP3Q53T59 392 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 GNASQ5JWF2 1037 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 CEP135Q66GS9 1140 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 SPECC1LQ69YQ0 1117 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 ARMCX5Q6P1M9 558 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 NFRKBQ6P4R8 1299 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 SLC39A4Q6P5W5 647 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 FRMD5Q7Z6J6 570 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 TRIM59Q8IWR1 403 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 ZBTB8OSQ8IWT0 167 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 FAM186BQ8IYM0 893 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 PLCD3Q8N3E9 789 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 RNF149Q8NC42 400 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 TRIM44Q96DX7 344 aaPredicted RBP7.28□□□□□ -1.24
VPS41-204ENST00000413141 BICD1Q96G01 975 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 NLRP4Q96MN2 994 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 MAP7D2Q96T17 732 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 CBWD1Q9BRT8 395 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 MTG1Q9BT17 334 aaPredicted RBP7.28□□□□□ -1.24
VPS41-204ENST00000413141 MKNK1Q9BUB5 465 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 BEGAINQ9BUH8 593 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 NFKBIZQ9BYH8 718 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 C2orf40Q9H1Z8 148 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms