RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 HDAC6Q9UBN7 1215 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 ADGBQ8N7X0 1667 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 H0YC42 278 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 MYO1CO00159 1063 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 FNTAP49354 379 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 CALN1Q9BXU9 219 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 ANO3Q9BYT9 981 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 ABCC2Q92887 1545 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 REREQ9P2R6 1566 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 A0A0G2JND7 137 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 ATP5BP06576 529 aaKnown RBP7.83□□□□□ -1.16
PTPN3-203ENST00000412145 HPCAP84074 193 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 SLC12A1Q13621 1099 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 FAM47CQ5HY64 1035 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 ZBTB41Q5SVQ8 909 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 DCLK2Q8N568 766 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 RPF1Q9H9Y2 349 aaKnown RBP7.83□□□□□ -1.16
PTPN3-203ENST00000412145 ERAP1Q9NZ08 941 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 POTEFA5A3E0 1075 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 KLRF2D3W0D1 207 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 TEX28O15482 410 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 EPS8Q12929 822 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 USH1GQ495M9 461 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 APOA5Q6Q788 366 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 CHST3Q7LGC8 479 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 ATP6V1G3Q96LB4 118 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 TGS1Q96RS0 853 aaKnown RBP7.83□□□□□ -1.16
PTPN3-203ENST00000412145 CDY2AQ9Y6F7 541 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 CDY1Q9Y6F8 540 aa7.83□□□□□ -1.16
PTPN3-203ENST00000412145 ELF1P32519 619 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 FAM149B1Q96BN6 582 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 DESI2Q9BSY9 194 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 AATFQ9NY61 560 aaKnown RBP eCLIP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 VPS54Q9P1Q0 977 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 SUGT1Q9Y2Z0 365 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 M0R2C6 588 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 DDX39AO00148 427 aaKnown RBP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 HOXB6P17509 224 aaKnown RBP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 DDIT3P35638 169 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 ITGA1P56199 1179 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 SNX30Q5VWJ9 437 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 POTEEQ6S8J3 1075 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 RGS9BPQ6ZS82 235 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 MFN1Q8IWA4 741 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 BLZF1Q9H2G9 400 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 KANSL2Q9H9L4 492 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 CACNA2D2Q9NY47 1150 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 ZBTB7BO15156 539 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 TBC1D12O60347 775 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 A1BGP04217 495 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 KRT74Q7RTS7 529 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 TLK2Q86UE8 772 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 COG1Q8WTW3 980 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 MAGED4Q96JG8 741 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 SPATA16Q9BXB7 569 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 FRMD8P1Q9BZ68 369 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 C2orf40Q9H1Z8 148 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 SMARCAD1Q9H4L7 1026 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 RIC8BQ9NVN3 520 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 FBXO40Q9UH90 709 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 NOVA2Q9UNW9 492 aaKnown RBP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 PLAAQ9Y263 795 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 SF3B1O75533 1304 aaKnown RBP eCLIP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 DIAPH2O60879 1101 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 BYSLQ13895 437 aaKnown RBP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 ZNF790Q6PG37 636 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 USP13Q92995 863 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 OSBPL1AQ9BXW6 950 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 ATG3Q9NT62 314 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 ADA2Q9NZK5 511 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 KLHL8Q9P2G9 620 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 COPG2Q9UBF2 871 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 PCDHA7Q9UN72 937 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 MTO1Q9Y2Z2 717 aaKnown RBP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 PCDHA1Q9Y5I3 950 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 PITPNM2Q9BZ72 1349 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 TALDO1P37837 337 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 TECP42680 631 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 PMS1P54277 932 aaKnown RBP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 NLRP9Q7RTR0 991 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 GTSE1Q9NYZ3 720 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 SAP30BPQ9UHR5 308 aaKnown RBP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 ATP10AO60312 1499 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 STX7O15400 261 aaKnown RBP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 ABL1P00519 1130 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 FDX1P10109 184 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 CAPZA2P47755 286 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 MXD4Q14582 209 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 TERF2Q15554 542 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 BBS9Q3SYG4 887 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 LONRF3Q496Y0 759 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 CERKLQ49MI3 558 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-203ENST00000412145 DDHD1Q8NEL9 900 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 MKL2Q9ULH7 1088 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 MAP3K19Q56UN5 1328 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 PPIP5K2O43314 1243 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 RXRAP19793 462 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 MAPK1P28482 360 aa7.82□□□□□ -1.16
PTPN3-203ENST00000412145 DPY19L2Q6NUT2 758 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms