RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 CAGE1Q8TC20 777 aa14.78□□□□□ -0.04
LIMS1-205ENST00000410093 FAM81BQ96LP2 452 aa14.78□□□□□ -0.04
LIMS1-205ENST00000410093 MPHOSPH6Q99547 160 aaKnown RBP14.78□□□□□ -0.04
LIMS1-205ENST00000410093 ACBD3Q9H3P7 528 aa14.78□□□□□ -0.04
LIMS1-205ENST00000410093 ANKZF1Q9H8Y5 726 aa14.78□□□□□ -0.04
LIMS1-205ENST00000410093 ZNF446Q9NWS9 450 aa14.78□□□□□ -0.04
LIMS1-205ENST00000410093 SAGE1Q9NXZ1 904 aa14.78□□□□□ -0.04
LIMS1-205ENST00000410093 PPME1Q9Y570 386 aa14.78□□□□□ -0.04
LIMS1-205ENST00000410093 MYH9P35579 1960 aaKnown RBP14.78□□□□□ -0.04
LIMS1-205ENST00000410093 KIAA0391O15091 583 aaKnown RBP14.77□□□□□ -0.04
LIMS1-205ENST00000410093 EIF3JO75822 258 aaKnown RBP14.77□□□□□ -0.04
LIMS1-205ENST00000410093 KCNA2P16389 499 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 ERCC3P19447 782 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 SOX5P35711 763 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 MYL7Q01449 175 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 SREBF2Q12772 1141 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 TMEM132BQ14DG7 1078 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 STXBP2Q15833 593 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 KIAA0753Q2KHM9 967 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 GLE1Q53GS7 698 aaKnown RBP14.77□□□□□ -0.04
LIMS1-205ENST00000410093 SMYD5Q6GMV2 418 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 MMGT1Q8N4V1 131 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.77□□□□□ -0.04
LIMS1-205ENST00000410093 JPH1Q9HDC5 661 aaPredicted RBP14.77□□□□□ -0.04
LIMS1-205ENST00000410093 SLC9A2Q9UBY0 812 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 APEX2Q9UBZ4 518 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 RIPK3Q9Y572 518 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 CSADQ9Y600 493 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 FHOD1Q9Y613 1164 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 DUSP10Q9Y6W6 482 aa14.77□□□□□ -0.04
LIMS1-205ENST00000410093 A0A087X0T9 212 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 GRID2IPA4D2P6 1211 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 UNCXA6NJT0 531 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 ENC1O14682 589 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 TRPA1O75762 1119 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 CAPN15O75808 1086 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 CCNE2O96020 404 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 FAM228BP0C875 321 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 GTF2H1P32780 548 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 CYP2J2P51589 502 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 PTK2Q05397 1052 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 MKRN3Q13064 507 aaKnown RBP14.76□□□□□ -0.05
LIMS1-205ENST00000410093 LBX2Q6XYB7 198 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.76□□□□□ -0.05
LIMS1-205ENST00000410093 HDXQ7Z353 690 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 SYCE1Q8N0S2 351 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 PROCA1Q8NCQ7 364 aaPredicted RBP14.76□□□□□ -0.05
LIMS1-205ENST00000410093 OSBPL9Q96SU4 736 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 RNF186Q9NXI6 227 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 PKD2L1Q9P0L9 805 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 ADAMTS1Q9UHI8 967 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 CAPN6Q9Y6Q1 641 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 SSC5DA1L4H1 1573 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 SPDYE16A6NNV3 312 aaPredicted RBP14.76□□□□□ -0.05
LIMS1-205ENST00000410093 BACH1O14867 736 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 ATP9AO75110 1047 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 USP2O75604 605 aaPredicted RBP14.76□□□□□ -0.05
LIMS1-205ENST00000410093 MOCS3O95396 460 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 VAMP7P51809 220 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 NAP1L1P55209 391 aaKnown RBP14.76□□□□□ -0.05
LIMS1-205ENST00000410093 CFAP221Q4G0U5 840 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 XKR3Q5GH77 459 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 LDLRAD1Q5T700 205 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 CCDC181Q5TID7 509 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 ALKBH5Q6P6C2 394 aaKnown RBP14.76□□□□□ -0.05
LIMS1-205ENST00000410093 RIOX2Q8IUF8 465 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 MAP4K3Q8IVH8 894 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 ANKRD13AQ8IZ07 590 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 KIAA1586Q9HCI6 787 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 A1CFQ9NQ94 594 aaKnown RBP14.76□□□□□ -0.05
LIMS1-205ENST00000410093 NAGPAQ9UK23 515 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 NENFQ9UMX5 172 aa14.76□□□□□ -0.05
LIMS1-205ENST00000410093 LOC102724159A0A0B4J2E5 919 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 F8VZ95 297 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 H2AFZP0C0S5 128 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 TGFB3P10600 412 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 ACTN1P12814 892 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 CBX1P83916 185 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 PWP2Q15269 919 aaKnown RBP14.75□□□□□ -0.05
LIMS1-205ENST00000410093 LONRF2Q1L5Z9 754 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 H2AFVQ71UI9 128 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 ZNF571Q7Z3V5 609 aaPredicted RBP14.75□□□□□ -0.05
LIMS1-205ENST00000410093 CREG2Q8IUH2 290 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 TMC2Q8TDI7 906 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 ZFP91Q96JP5 570 aaPredicted RBP14.75□□□□□ -0.05
LIMS1-205ENST00000410093 IFT74Q96LB3 600 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 INTS2Q9H0H0 1204 aaKnown RBP14.75□□□□□ -0.05
LIMS1-205ENST00000410093 MLXIPQ9HAP2 919 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 HSPBP1Q9NZL4 362 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 HDAC6Q9UBN7 1215 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 DNAJC12Q9UKB3 198 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 TBX20Q9UMR3 447 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 FZD1Q9UP38 647 aa14.75□□□□□ -0.05
LIMS1-205ENST00000410093 CXCL11O14625 94 aa14.74□□□□□ -0.05
LIMS1-205ENST00000410093 ATG7O95352 703 aa14.74□□□□□ -0.05
LIMS1-205ENST00000410093 GARTP22102 1010 aa14.74□□□□□ -0.05
LIMS1-205ENST00000410093 PEX3P56589 373 aa14.74□□□□□ -0.05
LIMS1-205ENST00000410093 PPATQ06203 517 aa14.74□□□□□ -0.05
LIMS1-205ENST00000410093 DGKZQ13574 1117 aa14.74□□□□□ -0.05
LIMS1-205ENST00000410093 CLUL1Q15846 466 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms