RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 SRGAP1Q7Z6B7 1085 aa28.38■■■□□ 2.13
C2orf88-204ENST00000409870 INO80BQ9C086 356 aaPredicted RBP28.38■■■□□ 2.13
C2orf88-204ENST00000409870 KBTBD4Q9NVX7 518 aa28.38■■■□□ 2.13
C2orf88-204ENST00000409870 GPR182O15218 404 aa28.37■■■□□ 2.13
C2orf88-204ENST00000409870 BAIAP3O94812 1187 aa28.37■■■□□ 2.13
C2orf88-204ENST00000409870 TPRNQ4KMQ1 711 aa28.37■■■□□ 2.13
C2orf88-204ENST00000409870 IFT74Q96LB3 600 aa28.37■■■□□ 2.13
C2orf88-204ENST00000409870 C17orf75Q9HAS0 396 aa28.37■■■□□ 2.13
C2orf88-204ENST00000409870 MSRAQ9UJ68 235 aa28.37■■■□□ 2.13
C2orf88-204ENST00000409870 ST3GAL5Q9UNP4 418 aa28.37■■■□□ 2.13
C2orf88-204ENST00000409870 CHD9Q3L8U1 2897 aa28.37■■■□□ 2.13
C2orf88-204ENST00000409870 PRUNE2Q8WUY3 3088 aa28.37■■■□□ 2.13
C2orf88-204ENST00000409870 MYMKA6NI61 221 aa28.36■■■□□ 2.13
C2orf88-204ENST00000409870 LRRIQ4A6NIV6 560 aa28.36■■■□□ 2.13
C2orf88-204ENST00000409870 ZBBXA8MT70 800 aa28.36■■■□□ 2.13
C2orf88-204ENST00000409870 KRT18P05783 430 aaKnown RBP28.36■■■□□ 2.13
C2orf88-204ENST00000409870 SYKP43405 635 aa28.36■■■□□ 2.13
C2orf88-204ENST00000409870 CACNB1Q02641 598 aaPredicted RBP28.36■■■□□ 2.13
C2orf88-204ENST00000409870 GIT2Q14161 759 aa28.36■■■□□ 2.13
C2orf88-204ENST00000409870 CDCA2Q69YH5 1023 aaPredicted RBP28.36■■■□□ 2.13
C2orf88-204ENST00000409870 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.36■■■□□ 2.13
C2orf88-204ENST00000409870 MINDY3Q9H8M7 445 aa28.36■■■□□ 2.13
C2orf88-204ENST00000409870 SLC4A7Q9Y6M7 1214 aa28.36■■■□□ 2.13
C2orf88-204ENST00000409870 ACTN4O43707 911 aaKnown RBP28.35■■■□□ 2.13
C2orf88-204ENST00000409870 CSDE1O75534 798 aaKnown RBP28.35■■■□□ 2.13
C2orf88-204ENST00000409870 SFPQP23246 707 aaKnown RBP eCLIP28.35■■■□□ 2.13
C2orf88-204ENST00000409870 NFX1Q12986 1120 aaKnown RBP28.35■■■□□ 2.13
C2orf88-204ENST00000409870 IKBKEQ14164 716 aa28.35■■■□□ 2.13
C2orf88-204ENST00000409870 FAM43BQ6ZT52 329 aaPredicted RBP28.35■■■□□ 2.13
C2orf88-204ENST00000409870 DDX12PQ92771 950 aa28.35■■■□□ 2.13
C2orf88-204ENST00000409870 USP25Q9UHP3 1055 aa28.35■■■□□ 2.13
C2orf88-204ENST00000409870 ABHD14A-ACY1A0A1B0GW23 586 aa28.35■■■□□ 2.13
C2orf88-204ENST00000409870 EFCAB14O75071 495 aa28.35■■■□□ 2.13
C2orf88-204ENST00000409870 SLFN14P0C7P3 912 aa28.35■■■□□ 2.13
C2orf88-204ENST00000409870 PLS3P13797 630 aa28.35■■■□□ 2.13
C2orf88-204ENST00000409870 ZNF131P52739 623 aa28.35■■■□□ 2.13
C2orf88-204ENST00000409870 PEX3P56589 373 aa28.35■■■□□ 2.13
C2orf88-204ENST00000409870 DMP1Q13316 513 aaPredicted RBP28.35■■■□□ 2.13
C2orf88-204ENST00000409870 FTHL17Q9BXU8 183 aa28.35■■■□□ 2.13
C2orf88-204ENST00000409870 LRRC27Q9C0I9 530 aa28.35■■■□□ 2.13
C2orf88-204ENST00000409870 TMX1Q9H3N1 280 aa28.35■■■□□ 2.13
C2orf88-204ENST00000409870 SERTAD1Q9UHV2 236 aa28.35■■■□□ 2.13
C2orf88-204ENST00000409870 SFI1A8K8P3 1242 aa28.34■■■□□ 2.13
C2orf88-204ENST00000409870 DLL1O00548 723 aa28.34■■■□□ 2.13
C2orf88-204ENST00000409870 TBCAO75347 108 aaKnown RBP28.34■■■□□ 2.13
C2orf88-204ENST00000409870 FGFR4P22455 802 aa28.34■■■□□ 2.13
C2orf88-204ENST00000409870 NPTX2P47972 431 aa28.34■■■□□ 2.13
C2orf88-204ENST00000409870 MBTD1Q05BQ5 628 aa28.34■■■□□ 2.13
C2orf88-204ENST00000409870 DYMQ7RTS9 669 aa28.34■■■□□ 2.13
C2orf88-204ENST00000409870 CEP57L1Q8IYX8 460 aa28.34■■■□□ 2.13
C2orf88-204ENST00000409870 DEPTORQ8TB45 409 aa28.34■■■□□ 2.13
C2orf88-204ENST00000409870 STAMQ92783 540 aa28.34■■■□□ 2.13
C2orf88-204ENST00000409870 DNAJC19Q96DA6 116 aa28.34■■■□□ 2.13
C2orf88-204ENST00000409870 C2orf40Q9H1Z8 148 aa28.34■■■□□ 2.13
C2orf88-204ENST00000409870 ADGRA3Q8IWK6 1321 aa28.33■■■□□ 2.13
C2orf88-204ENST00000409870 FAM13AO94988 1023 aa28.33■■■□□ 2.13
C2orf88-204ENST00000409870 AMPD3Q01432 767 aa28.33■■■□□ 2.13
C2orf88-204ENST00000409870 ZBTB8OSQ8IWT0 167 aa28.33■■■□□ 2.13
C2orf88-204ENST00000409870 KIFC3Q9BVG8 833 aa28.33■■■□□ 2.13
C2orf88-204ENST00000409870 NKX2-4Q9H2Z4 354 aa28.33■■■□□ 2.13
C2orf88-204ENST00000409870 PARVGQ9HBI0 331 aa28.33■■■□□ 2.13
C2orf88-204ENST00000409870 LARSQ9P2J5 1176 aaKnown RBP28.33■■■□□ 2.13
C2orf88-204ENST00000409870 INO80B-WBP1J3KQ70 363 aa28.32■■■□□ 2.12
C2orf88-204ENST00000409870 PCBP1Q15365 356 aaKnown RBP eCLIP28.32■■■□□ 2.12
C2orf88-204ENST00000409870 LONRF3Q496Y0 759 aa28.32■■■□□ 2.12
C2orf88-204ENST00000409870 CATSPER4Q7RTX7 472 aa28.32■■■□□ 2.12
C2orf88-204ENST00000409870 SPIRE2Q8WWL2 714 aa28.32■■■□□ 2.12
C2orf88-204ENST00000409870 TRIM9Q9C026 710 aa28.32■■■□□ 2.12
C2orf88-204ENST00000409870 KCNG1Q9UIX4 513 aa28.32■■■□□ 2.12
C2orf88-204ENST00000409870 YBX2Q9Y2T7 364 aaKnown RBP28.32■■■□□ 2.12
C2orf88-204ENST00000409870 PTPRSQ13332 1948 aa28.32■■■□□ 2.12
C2orf88-204ENST00000409870 GADD45BO75293 160 aaPredicted RBP28.31■■■□□ 2.12
C2orf88-204ENST00000409870 ATP2A2P16615 1042 aaKnown RBP28.31■■■□□ 2.12
C2orf88-204ENST00000409870 WDR5P61964 334 aaKnown RBP28.31■■■□□ 2.12
C2orf88-204ENST00000409870 CNNM4Q6P4Q7 775 aa28.31■■■□□ 2.12
C2orf88-204ENST00000409870 LINC01599Q8WXQ3 324 aa28.31■■■□□ 2.12
C2orf88-204ENST00000409870 NTPCRQ9BSD7 190 aaKnown RBP28.31■■■□□ 2.12
C2orf88-204ENST00000409870 KMT5AQ9NQR1 393 aa28.31■■■□□ 2.12
C2orf88-204ENST00000409870 ARHGAP28Q9P2N2 729 aa28.31■■■□□ 2.12
C2orf88-204ENST00000409870 CHD7Q9P2D1 2997 aa28.3■■■□□ 2.12
C2orf88-204ENST00000409870 CCDC169A6NNP5 214 aa28.3■■■□□ 2.12
C2orf88-204ENST00000409870 MGEA5O60502 916 aa28.3■■■□□ 2.12
C2orf88-204ENST00000409870 EFNA5P52803 228 aa28.3■■■□□ 2.12
C2orf88-204ENST00000409870 RABGGTBP53611 331 aa28.3■■■□□ 2.12
C2orf88-204ENST00000409870 FMR1NBQ8N0W7 255 aaPredicted RBP28.3■■■□□ 2.12
C2orf88-204ENST00000409870 GBP4Q96PP9 640 aa28.3■■■□□ 2.12
C2orf88-204ENST00000409870 CCDC113Q9H0I3 377 aa28.3■■■□□ 2.12
C2orf88-204ENST00000409870 SLC28A3Q9HAS3 691 aa28.3■■■□□ 2.12
C2orf88-204ENST00000409870 AGPAT5Q9NUQ2 364 aa28.3■■■□□ 2.12
C2orf88-204ENST00000409870 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.29■■■□□ 2.12
C2orf88-204ENST00000409870 FRMD3A2A2Y4 597 aa28.29■■■□□ 2.12
C2orf88-204ENST00000409870 ERLIN2O94905 339 aa28.29■■■□□ 2.12
C2orf88-204ENST00000409870 ZNF202O95125 648 aa28.29■■■□□ 2.12
C2orf88-204ENST00000409870 KCNJ6P48051 423 aa28.29■■■□□ 2.12
C2orf88-204ENST00000409870 FAM160A1Q05DH4 1040 aa28.29■■■□□ 2.12
C2orf88-204ENST00000409870 DSC3Q14574 896 aa28.29■■■□□ 2.12
C2orf88-204ENST00000409870 AMHR2Q16671 573 aa28.29■■■□□ 2.12
C2orf88-204ENST00000409870 PPP4R3CPQ6ZMV5 832 aa28.29■■■□□ 2.12
C2orf88-204ENST00000409870 MYCT1Q8N699 235 aa28.29■■■□□ 2.12
C2orf88-204ENST00000409870 ENGASEQ8NFI3 743 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms