RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 MMP3P08254 477 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 TPM1P09493 284 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 TERF1P54274 439 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 FAM193AP78312 1265 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 ENPEPQ07075 957 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 NOGQ13253 232 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 NOLC1Q14978 699 aaKnown RBP eCLIP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 GJC2Q5T442 439 aaPredicted RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 CYP4F22Q6NT55 531 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 DPY19L2P1Q6NXN4 242 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 SLC39A4Q6P5W5 647 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 TRMT1LQ7Z2T5 733 aaKnown RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 LINC01465Q8N7H1 131 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 GLG1Q92896 1179 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 BAG1Q99933 345 aaPredicted RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 EDEM3Q9BZQ6 932 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 TMEM134Q9H6X4 195 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 PHLPP2Q6ZVD8 1323 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 GTPBP10A4D1E9 387 aaKnown RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 CCDC169A6NNP5 214 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 NRDCO43847 1150 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 PPFIA4O75335 1185 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 KLK7P49862 253 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 KCNH2Q12809 1159 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 MKRN4PQ13434 485 aaPredicted RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 ZNF484Q5JVG2 852 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 IER5Q5VY09 327 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 E4F1Q66K89 784 aaPredicted RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 CDCA2Q69YH5 1023 aaPredicted RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 FAM186BQ8IYM0 893 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 SYCP3Q8IZU3 236 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 AFG1LQ8WV93 481 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 TCP11Q8WWU5 503 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 TMEM143Q96AN5 459 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 JPH2Q9BR39 696 aaPredicted RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 KIFC3Q9BVG8 833 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 CREBZFQ9NS37 354 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 STYXL1Q9Y6J8 313 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 PDCD11Q14690 1871 aaKnown RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 A6NJR5 290 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 TISP43B9A030 160 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 TNPO2O14787 897 aaKnown RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 C22orf31O95567 290 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 AFPP02771 609 aaKnown RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 XRCC5P13010 732 aaKnown RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 ADSSP30520 456 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 HNRNPH3P31942 346 aaKnown RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 ZBED6P86452 979 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 CAPSQ13938 189 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 MEA1Q16626 185 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 BRDTQ58F21 947 aaPredicted RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 C17orf53Q8N3J3 647 aaPredicted RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 FBXL18Q96ME1 805 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 CCDC113Q9H0I3 377 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 RNPEPQ9H4A4 650 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 HSPBP1Q9NZL4 362 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 ZHX1Q9UKY1 873 aaPredicted RBP6.04□□□□□ -1.44
EPHA4-202ENST00000409854 Q9Y3F1 56 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 SCN10AQ9Y5Y9 1956 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 ANKRD63C9JTQ0 380 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 PES1O00541 588 aaKnown RBP6.03□□□□□ -1.44
EPHA4-202ENST00000409854 GARTP22102 1010 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 MARK3P27448 753 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 TNFAIP2Q03169 654 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 CCL14Q16627 93 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 CCAR2Q8N163 923 aaKnown RBP6.03□□□□□ -1.44
EPHA4-202ENST00000409854 CCDC155Q8N6L0 562 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 OR6J1Q8NGC5 347 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 CBWD1Q9BRT8 395 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 PLCB1Q9NQ66 1216 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 FRMD4BQ9Y2L6 1034 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 TRIP12Q14669 1992 aaPredicted RBP6.03□□□□□ -1.44
EPHA4-202ENST00000409854 EPHB6O15197 1021 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 PMM2O15305 246 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 ADCY3O60266 1144 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 NOL4O94818 638 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 CNGA1P29973 690 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 KRT9P35527 623 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 CYP2J2P51589 502 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 FCGRTP55899 365 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 LACTBP83111 547 aaPredicted RBP6.03□□□□□ -1.44
EPHA4-202ENST00000409854 CDK17Q00537 523 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 BFSP1Q12934 665 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 DRP2Q13474 957 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 MXD4Q14582 209 aaPredicted RBP6.03□□□□□ -1.44
EPHA4-202ENST00000409854 INTS8Q75QN2 995 aaKnown RBP6.03□□□□□ -1.44
EPHA4-202ENST00000409854 XXYLT1Q8NBI6 393 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 OR8K1Q8NGG5 319 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 CPLX3Q8WVH0 158 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 BAP1Q92560 729 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 CAPNS2Q96L46 248 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 NFKBIZQ9BYH8 718 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 GANQ9H2C0 597 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 FBXL5Q9UKA1 691 aa6.03□□□□□ -1.44
EPHA4-202ENST00000409854 ZNF215Q9UL58 517 aaPredicted RBP6.03□□□□□ -1.44
EPHA4-202ENST00000409854 LUC7L2Q9Y383 392 aaKnown RBP6.03□□□□□ -1.44
EPHA4-202ENST00000409854 KIAA0391O15091 583 aaKnown RBP6.02□□□□□ -1.44
EPHA4-202ENST00000409854 EXOC3O60645 756 aa6.02□□□□□ -1.44
EPHA4-202ENST00000409854 TRIM21P19474 475 aaKnown RBP6.02□□□□□ -1.44
EPHA4-202ENST00000409854 CYP2B6P20813 491 aa6.02□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms