RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 AMHR2Q16671 573 aa16.34■□□□□ 0.21
SUMO1-207ENST00000409498 CSPP1Q1MSJ5 1256 aa16.34■□□□□ 0.21
SUMO1-207ENST00000409498 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.34■□□□□ 0.21
SUMO1-207ENST00000409498 TOP1MTQ969P6 601 aa16.34■□□□□ 0.21
SUMO1-207ENST00000409498 DNAJC19Q96DA6 116 aa16.34■□□□□ 0.21
SUMO1-207ENST00000409498 PRIMPOLQ96LW4 560 aa16.34■□□□□ 0.21
SUMO1-207ENST00000409498 REEP2Q9BRK0 252 aa16.34■□□□□ 0.21
SUMO1-207ENST00000409498 C1orf112Q9NSG2 853 aa16.34■□□□□ 0.21
SUMO1-207ENST00000409498 ARHGAP28Q9P2N2 729 aa16.34■□□□□ 0.21
SUMO1-207ENST00000409498 MYH11P35749 1972 aa16.34■□□□□ 0.21
SUMO1-207ENST00000409498 A0A1B0GVL5 298 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 FRMD3A2A2Y4 597 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 MYMKA6NI61 221 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 MGEA5O60502 916 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 SCP2P22307 547 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 AXLP30530 894 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 NPTX2P47972 431 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 KCNJ6P48051 423 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 EFNA5P52803 228 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 SMAD3P84022 425 aaKnown RBP16.33■□□□□ 0.2
SUMO1-207ENST00000409498 DDX12PQ92771 950 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 DHX58Q96C10 678 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 CCDC113Q9H0I3 377 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 TMEM134Q9H6X4 195 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 POLD4Q9HCU8 107 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 AGPAT5Q9NUQ2 364 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 LARSQ9P2J5 1176 aaKnown RBP16.33■□□□□ 0.2
SUMO1-207ENST00000409498 PHLPP2Q6ZVD8 1323 aa16.33■□□□□ 0.2
SUMO1-207ENST00000409498 NPHP3-ACAD11A0A0J9YXS1 232 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 LRRIQ4A6NIV6 560 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 ZBBXA8MT70 800 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 C9IYK1 514 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 RBAK-RBAKDNI3L0D1 243 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 CSDE1O75534 798 aaKnown RBP16.32■□□□□ 0.2
SUMO1-207ENST00000409498 AMHP03971 560 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 SLFN14P0C7P3 912 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 ZSCAN20P17040 1043 aaPredicted RBP16.32■□□□□ 0.2
SUMO1-207ENST00000409498 HOXA11P31270 313 aaPredicted RBP16.32■□□□□ 0.2
SUMO1-207ENST00000409498 PEX3P56589 373 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 DEFB103AP81534 67 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 AMPD3Q01432 767 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 DMP1Q13316 513 aaPredicted RBP16.32■□□□□ 0.2
SUMO1-207ENST00000409498 DHX8Q14562 1220 aaKnown RBP16.32■□□□□ 0.2
SUMO1-207ENST00000409498 HABP4Q5JVS0 413 aaKnown RBP16.32■□□□□ 0.2
SUMO1-207ENST00000409498 SLC24A5Q71RS6 500 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 CATSPER4Q7RTX7 472 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 ADGRA3Q8IWK6 1321 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 ZBTB8OSQ8IWT0 167 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 MRPS27Q92552 414 aaKnown RBP16.32■□□□□ 0.2
SUMO1-207ENST00000409498 FIZ1Q96SL8 496 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 ADAM2Q99965 735 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 C7orf25Q9BPX7 421 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 ELAC1Q9H777 363 aaKnown RBP16.32■□□□□ 0.2
SUMO1-207ENST00000409498 PARVGQ9HBI0 331 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 PRMT7Q9NVM4 692 aaPredicted RBP16.32■□□□□ 0.2
SUMO1-207ENST00000409498 DACT1Q9NYF0 836 aa16.32■□□□□ 0.2
SUMO1-207ENST00000409498 SFI1A8K8P3 1242 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 INO80B-WBP1J3KQ70 363 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 ACTN4O43707 911 aaKnown RBP16.31■□□□□ 0.2
SUMO1-207ENST00000409498 TSPAN1O60635 241 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 GJB5O95377 273 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 MAPTP10636 758 aaKnown RBP16.31■□□□□ 0.2
SUMO1-207ENST00000409498 ATP2A2P16615 1042 aaKnown RBP16.31■□□□□ 0.2
SUMO1-207ENST00000409498 FGFR4P22455 802 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 SYKP43405 635 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 SARSP49591 514 aaKnown RBP16.31■□□□□ 0.2
SUMO1-207ENST00000409498 NDUFA8P51970 172 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 NCKAP1LP55160 1127 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 RAD51AP2Q09MP3 1159 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 HERC6Q8IVU3 1022 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 DEPTORQ8TB45 409 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 CCDC51Q96ER9 411 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 TRIM9Q9C026 710 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 ST6GALNAC4Q9H4F1 302 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 KMT5AQ9NQR1 393 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 SEL1LQ9UBV2 794 aa16.31■□□□□ 0.2
SUMO1-207ENST00000409498 RANBP2P49792 3224 aaKnown RBP16.31■□□□□ 0.2
SUMO1-207ENST00000409498 A0A0U1RQF3 1178 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 A0A1B0GUA9 196 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 H0YCG3 227 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 ACKR2O00590 384 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 ZNF623O75123 536 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 FAM13AO94988 1023 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 KRT18P05783 430 aaKnown RBP16.3■□□□□ 0.2
SUMO1-207ENST00000409498 MYL1P05976 194 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 SMTNP53814 917 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 HTRA4P83105 476 aaPredicted RBP16.3■□□□□ 0.2
SUMO1-207ENST00000409498 CACNB1Q02641 598 aaPredicted RBP16.3■□□□□ 0.2
SUMO1-207ENST00000409498 MAPK6Q16659 721 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 FSIP1Q8NA03 581 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 SLC17A8Q8NDX2 589 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 TMEM161BQ8NDZ6 487 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 ENGASEQ8NFI3 743 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 GOLPH3LQ9H4A5 285 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 SERTAD1Q9UHV2 236 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 COL4A6Q14031 1691 aa16.3■□□□□ 0.2
SUMO1-207ENST00000409498 CNTNAP2Q9UHC6 1331 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 DENND3A2RUS2 1198 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 CCDC169A6NNP5 214 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 K7ERI5 159 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms