RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CETN1Q12798 172 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 MOGSQ13724 837 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 GPR162Q16538 588 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 EEPD1Q7L9B9 569 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 ZNF571Q7Z3V5 609 aaPredicted RBP22.54■■□□□ 1.2
USP39-203ENST00000409470 CTAGE6Q86UF2 777 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 CTAGE4Q8IX94 777 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 POLR3FQ9H1D9 316 aaPredicted RBP22.54■■□□□ 1.2
USP39-203ENST00000409470 EPC1Q9H2F5 836 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 R3HDMLQ9H3Y0 253 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 ARGLU1Q9NWB6 273 aaPredicted RBP22.54■■□□□ 1.2
USP39-203ENST00000409470 DNAJC12Q9UKB3 198 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 SRCAPQ6ZRS2 3230 aa22.54■■□□□ 1.2
USP39-203ENST00000409470 GOLGA8IPA6NC78 632 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 IQCA1LA6NCM1 817 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 GOLGA8JA6NMD2 632 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 ANKRD63C9JTQ0 380 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 TULP1O00294 542 aaPredicted RBP22.53■■□□□ 1.2
USP39-203ENST00000409470 MAPK13O15264 365 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 N4BP1O75113 896 aaKnown RBP22.53■■□□□ 1.2
USP39-203ENST00000409470 PGK2P07205 417 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 FERP16591 822 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 CNGA1P29973 690 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 PRKCIP41743 596 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 RTP1P59025 263 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 NEDD9Q14511 834 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 ZSWIM2Q8NEG5 633 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 JRKLQ9Y4A0 524 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 FARP2O94887 1054 aaPredicted RBP22.53■■□□□ 1.2
USP39-203ENST00000409470 ATP4AP20648 1035 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 EMC2Q15006 297 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 Q3C1V9 767 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 WDR78Q5VTH9 848 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 NOX5Q96PH1 765 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 STK33Q9BYT3 514 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 APEX2Q9UBZ4 518 aa22.53■■□□□ 1.2
USP39-203ENST00000409470 SRGAP2O75044 1071 aa22.52■■□□□ 1.2
USP39-203ENST00000409470 GFPT2O94808 682 aa22.52■■□□□ 1.2
USP39-203ENST00000409470 KCTD2Q14681 263 aa22.52■■□□□ 1.2
USP39-203ENST00000409470 VPS36Q86VN1 386 aa22.52■■□□□ 1.2
USP39-203ENST00000409470 RNF10Q8N5U6 811 aaKnown RBP22.52■■□□□ 1.2
USP39-203ENST00000409470 MMP19Q99542 508 aa22.52■■□□□ 1.2
USP39-203ENST00000409470 PNMA6AP0CW24 399 aaPredicted RBP22.52■■□□□ 1.19
USP39-203ENST00000409470 TGFB3P10600 412 aa22.52■■□□□ 1.19
USP39-203ENST00000409470 ADSSP30520 456 aa22.52■■□□□ 1.19
USP39-203ENST00000409470 GCLMP48507 274 aa22.52■■□□□ 1.19
USP39-203ENST00000409470 TUBB4BP68371 445 aa22.52■■□□□ 1.19
USP39-203ENST00000409470 SNAPC2Q13487 334 aa22.52■■□□□ 1.19
USP39-203ENST00000409470 KIAA0753Q2KHM9 967 aa22.52■■□□□ 1.19
USP39-203ENST00000409470 GPAT2Q6NUI2 795 aa22.52■■□□□ 1.19
USP39-203ENST00000409470 SLC10A4Q96EP9 437 aa22.52■■□□□ 1.19
USP39-203ENST00000409470 SAAL1Q96ER3 474 aa22.52■■□□□ 1.19
USP39-203ENST00000409470 CCDC94Q9BW85 323 aaPredicted RBP22.52■■□□□ 1.19
USP39-203ENST00000409470 SALL4Q9UJQ4 1053 aa22.52■■□□□ 1.19
USP39-203ENST00000409470 CLEC11AQ9Y240 323 aa22.52■■□□□ 1.19
USP39-203ENST00000409470 ADGRA3Q8IWK6 1321 aa22.51■■□□□ 1.19
USP39-203ENST00000409470 GSTTP1A0A1W2PQM5 241 aa22.51■■□□□ 1.19
USP39-203ENST00000409470 F8VZ95 297 aa22.51■■□□□ 1.19
USP39-203ENST00000409470 H0YCG3 227 aa22.51■■□□□ 1.19
USP39-203ENST00000409470 BUB1O43683 1085 aa22.51■■□□□ 1.19
USP39-203ENST00000409470 SOX5P35711 763 aa22.51■■□□□ 1.19
USP39-203ENST00000409470 PPP3CAQ08209 521 aa22.51■■□□□ 1.19
USP39-203ENST00000409470 DRAP1Q14919 205 aaPredicted RBP22.51■■□□□ 1.19
USP39-203ENST00000409470 SNRNP35Q16560 246 aaKnown RBP22.51■■□□□ 1.19
USP39-203ENST00000409470 C10orf76Q5T2E6 689 aa22.51■■□□□ 1.19
USP39-203ENST00000409470 BICD1Q96G01 975 aa22.51■■□□□ 1.19
USP39-203ENST00000409470 DAAM1Q9Y4D1 1078 aa22.51■■□□□ 1.19
USP39-203ENST00000409470 IGKV6D-21A0A0A0MT36 114 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 P4HA2O15460 535 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 GGPS1O95749 300 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 ADRB2P07550 413 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 ANXA13P27216 316 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 LDLRAD1Q5T700 205 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 FAM160B1Q5W0V3 765 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 PNMA8AQ86V59 439 aaPredicted RBP22.5■■□□□ 1.19
USP39-203ENST00000409470 CBWD2Q8IUF1 395 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 POMGNT1Q8WZA1 660 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 CAPZA3Q96KX2 299 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 ZNF408Q9H9D4 720 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 KCNG1Q9UIX4 513 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 ZC3H4Q9UPT8 1303 aaKnown RBP22.5■■□□□ 1.19
USP39-203ENST00000409470 HNRNPDLO14979 420 aaKnown RBP22.5■■□□□ 1.19
USP39-203ENST00000409470 GJA5P36382 358 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 CLCN6P51797 869 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 NAB2Q15742 525 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 LY6KQ17RY6 165 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 TMEM143Q96AN5 459 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 PACSIN1Q9BY11 444 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 NRBP2Q9NSY0 501 aa22.5■■□□□ 1.19
USP39-203ENST00000409470 EVI5O60447 810 aa22.49■■□□□ 1.19
USP39-203ENST00000409470 ZSCAN20P17040 1043 aaPredicted RBP22.49■■□□□ 1.19
USP39-203ENST00000409470 RFX1P22670 979 aa22.49■■□□□ 1.19
USP39-203ENST00000409470 ABCD1P33897 745 aa22.49■■□□□ 1.19
USP39-203ENST00000409470 CKAP4Q07065 602 aaKnown RBP22.49■■□□□ 1.19
USP39-203ENST00000409470 ARHGAP44Q17R89 818 aa22.49■■□□□ 1.19
USP39-203ENST00000409470 C1orf220Q5T0J3 134 aa22.49■■□□□ 1.19
USP39-203ENST00000409470 METTL7BQ6UX53 244 aa22.49■■□□□ 1.19
USP39-203ENST00000409470 FMNL3Q8IVF7 1028 aa22.49■■□□□ 1.19
USP39-203ENST00000409470 LMO3Q8TAP4 145 aa22.49■■□□□ 1.19
USP39-203ENST00000409470 CAGE1Q8TC20 777 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms