RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SAAL1Q96ER3 474 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 EPSTI1Q96J88 318 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 ZNF512Q96ME7 567 aaPredicted RBP5.38□□□□□ -1.55
SCN3A-203ENST00000409101 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.38□□□□□ -1.55
SCN3A-203ENST00000409101 V9GYY5 206 aaPredicted RBP5.38□□□□□ -1.55
SCN3A-203ENST00000409101 CREB3O43889 395 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 PAMP19021 973 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 VPS41P49754 854 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 FKBP1AP62942 108 aaKnown RBP5.38□□□□□ -1.55
SCN3A-203ENST00000409101 CDK17Q00537 523 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 CCDC15Q0P6D6 951 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 DRP2Q13474 957 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 SGO2Q562F6 1265 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 EFHC2Q5JST6 749 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 SPATA24Q86W54 205 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 NKX2-3Q8TAU0 364 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 MFSD1Q9H3U5 465 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.38□□□□□ -1.55
SCN3A-203ENST00000409101 FANCLQ9NW38 375 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 DISP2A7MBM2 1401 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 LRRD1A4D1F6 860 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 SART1O43290 800 aaKnown RBP5.38□□□□□ -1.55
SCN3A-203ENST00000409101 MSCO60682 206 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 HOXC6P09630 235 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 VCAM1P19320 739 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 EVCP57679 992 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 HERVK_113P62684 666 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 FKBP1BP68106 108 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 ATF7IP2Q5U623 682 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 NXNQ6DKJ4 435 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 EMILIN2Q9BXX0 1053 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 SENP6Q9GZR1 1112 aaPredicted RBP5.38□□□□□ -1.55
SCN3A-203ENST00000409101 NGRNQ9NPE2 291 aaKnown RBP5.38□□□□□ -1.55
SCN3A-203ENST00000409101 SMYD2Q9NRG4 433 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 IPPQ9Y573 584 aa5.38□□□□□ -1.55
SCN3A-203ENST00000409101 STRNO43815 780 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 PDHBP11177 359 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 ODC1P11926 461 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 GCLMP48507 274 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 KPNA2P52292 529 aaKnown RBP5.37□□□□□ -1.55
SCN3A-203ENST00000409101 GTF2H3Q13889 308 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 LINC00301Q8NCQ3 95 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 OXER1Q8TDS5 423 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 FSD1LQ9BXM9 530 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 GPRC5DQ9NZD1 345 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 AGAP1Q9UPQ3 857 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 SETD1BQ9UPS6 1966 aaKnown RBP5.37□□□□□ -1.55
SCN3A-203ENST00000409101 BCL9O00512 1426 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 MAP3K13O43283 966 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 PPP4CP60510 307 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 CAPN12Q6ZSI9 719 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 ADAT2Q7Z6V5 191 aaKnown RBP5.37□□□□□ -1.55
SCN3A-203ENST00000409101 RAB42Q8N4Z0 105 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 TSC1Q92574 1164 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 DHX38Q92620 1227 aaKnown RBP5.37□□□□□ -1.55
SCN3A-203ENST00000409101 SPON2Q9BUD6 331 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 PRMT7Q9NVM4 692 aaPredicted RBP5.37□□□□□ -1.55
SCN3A-203ENST00000409101 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.37□□□□□ -1.55
SCN3A-203ENST00000409101 PDS5AQ29RF7 1337 aaKnown RBP5.37□□□□□ -1.55
SCN3A-203ENST00000409101 A0A087WWV3 80 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 ZBED1O96006 694 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 EGFRP00533 1210 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 SDC4P31431 198 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 ADCY1Q08828 1119 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 PLD1Q13393 1074 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 KNOP1Q1ED39 458 aaKnown RBP5.37□□□□□ -1.55
SCN3A-203ENST00000409101 C10orf76Q5T2E6 689 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 TDRD10Q5VZ19 366 aaKnown RBP5.37□□□□□ -1.55
SCN3A-203ENST00000409101 HDXQ7Z353 690 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 SIRT2Q8IXJ6 389 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 CCDC13Q8IYE1 715 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 LRRC71Q8N4P6 559 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 SAMD3Q8N6K7 520 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 GMCL1P1Q8NEA9 526 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 RDM1Q8NG50 284 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 SYT17Q9BSW7 474 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 IGFLR1Q9H665 355 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 TBX3O15119 743 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 SLC26A4O43511 780 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 CABYRO75952 493 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 SERPING1P05155 500 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 DSG3P32926 999 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 PDE1BQ01064 536 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 DDR1Q08345 913 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 TTC23LQ6PF05 361 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 ARHGAP18Q8N392 663 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 SRBD1Q8N5C6 995 aaKnown RBP5.37□□□□□ -1.55
SCN3A-203ENST00000409101 EEF2KMTQ96G04 330 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 SPATC1LQ9H0A9 340 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 EHD4Q9H223 541 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 DNAJC12Q9UKB3 198 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 PTPN22Q9Y2R2 807 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 TBKBP1A7MCY6 615 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 WNT10BO00744 389 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 CYP2C8P10632 490 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 PLS3P13797 630 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 CDC27P30260 824 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 GNA15P30679 374 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 INPP5BP32019 993 aa5.37□□□□□ -1.55
SCN3A-203ENST00000409101 SSTR3P32745 418 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms