RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 ANKRD7Q92527 254 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 UBXN4Q92575 508 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 DRC1Q96MC2 740 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 SPAG5Q96R06 1193 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 REPIN1Q9BWE0 567 aaKnown RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 ASCC2Q9H1I8 757 aaPredicted RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 R3HDMLQ9H3Y0 253 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 ZNF408Q9H9D4 720 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 ANKEF1Q9NU02 776 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 MRFAP1Q9Y605 127 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 A0A0G2JLL6 359 aaPredicted RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 SPATA31C2B4DYI2 1134 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 CXCL11O14625 94 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 ENC1O14682 589 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 TLR2O60603 784 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 TRIM49P0CI25 452 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 TRIM49CP0CI26 452 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 BRD2P25440 801 aaKnown RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 PON1P27169 355 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 MAGEA1P43355 309 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 VAV2P52735 878 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 PRRT2Q7Z6L0 340 aaPredicted RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 RIOX2Q8IUF8 465 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 SMAP1Q8IYB5 467 aaPredicted RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 ANKRD13CQ8N6S4 541 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 PROCA1Q8NCQ7 364 aaPredicted RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 DNERQ8NFT8 737 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 RDM1Q8NG50 284 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 GOLGA5Q8TBA6 731 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 ATP6V0A1Q93050 837 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 OPTNQ96CV9 577 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 BORCS6Q96GS4 357 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 ACCSQ96QU6 501 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 IWS1Q96ST2 819 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 NAPGQ99747 312 aaPredicted RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 KIFC3Q9BVG8 833 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 STRA6Q9BX79 667 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 IFIH1Q9BYX4 1025 aaKnown RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 NUCKS1Q9H1E3 243 aaKnown RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 TMEM206Q9H813 350 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 DMAC2Q9NW81 257 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 GCNT4Q9P109 453 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 MYO1AQ9UBC5 1043 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 FBXO40Q9UH90 709 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 SEPT9Q9UHD8 586 aaPredicted RBP4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 PCDHA13Q9Y5I0 950 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 PHIPQ8WWQ0 1821 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 UBE4BO95155 1302 aa4.35□□□□□ -1.71
LRRTM4-201ENST00000409088 DKC1O60832 514 aaKnown RBP eCLIP4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 STAM2O75886 525 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 TFRCP02786 760 aaKnown RBP4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 UCHL3P15374 230 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 MMP16P51512 607 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 ALDH5A1P51649 535 aaPredicted RBP4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 SMTNP53814 917 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 GFPT1Q06210 699 aaPredicted RBP4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 KLHL30Q0D2K2 578 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 MTERF2Q49AM1 385 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 KLHDC7AQ5VTJ3 777 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 HGSNATQ68CP4 663 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 GJB7Q6PEY0 223 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 ABHD15Q6UXT9 468 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 ARMC9Q7Z3E5 817 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 SENP7Q9BQF6 1050 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 CBWD1Q9BRT8 395 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 MKNK1Q9BUB5 465 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 GANQ9H2C0 597 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 TXNRD2Q9NNW7 524 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 PUF60Q9UHX1 559 aaKnown RBP4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 CDC23Q9UJX2 597 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 FHOD1Q9Y613 1164 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 SBF1O95248 1867 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 RLFQ13129 1914 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 NFASCO94856 1347 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 GOLGA8IPA6NC78 632 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 GLTPD2A6NH11 291 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 GOLGA8JA6NMD2 632 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 SERPING1P05155 500 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 PGK2P07205 417 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 MAPTP10636 758 aaKnown RBP4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 KRT13P13646 458 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 NPTX2P47972 431 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 FMO5P49326 533 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 PRKCEQ02156 737 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 DMP1Q13316 513 aaPredicted RBP4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 PPIL2Q13356 520 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 ALCAMQ13740 583 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 ASIC2Q16515 512 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 NFIL3Q16649 462 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 TEX35Q5T0J7 233 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 MIS18BP1Q6P0N0 1132 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 ZSWIM2Q8NEG5 633 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 EPC1Q9H2F5 836 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 TAF1DQ9H5J8 278 aaPredicted RBP4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 PLCB1Q9NQ66 1216 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 KMT5AQ9NQR1 393 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 ADAMTS1Q9UHI8 967 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 AGTPBP1Q9UPW5 1226 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 DICER1Q9UPY3 1922 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms