RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 NR3C2P08235 984 aa14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 MYCLP12524 364 aaPredicted RBP14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 ITGA7Q13683 1181 aa14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 PGM5Q15124 567 aa14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 MEA1Q16626 185 aa14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 FAM26FQ5R3K3 315 aa14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 DEFB128Q7Z7B8 93 aa14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 RABGGTAQ92696 567 aa14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 NAPGQ99747 312 aaPredicted RBP14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 PDCD2LQ9BRP1 358 aa14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 UPF3AQ9H1J1 476 aaKnown RBP14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 LUC7LQ9NQ29 371 aaKnown RBP14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 CDC23Q9UJX2 597 aa14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 LCTP09848 1927 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 EIF3CLB5ME19 914 aaKnown RBP14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 USO1O60763 962 aaKnown RBP14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 PLA2G4BP0C869 781 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 EDNRBP24530 442 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 RPA1P27694 616 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 CCND2P30279 289 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 PMS1P54277 932 aaKnown RBP14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 TNFAIP2Q03169 654 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 EHHADHQ08426 723 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 SPA17Q15506 151 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 ELF2Q15723 593 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 STXBP2Q15833 593 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 PTPN21Q16825 1174 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 WHAMMP3Q1A5X7 153 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 ZNF569Q5MCW4 686 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 EEPD1Q7L9B9 569 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 DYMQ7RTS9 669 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 VSIG10LQ86VR7 867 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 KIAA0895Q8NCT3 520 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 MORC4Q8TE76 937 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 EIF3CQ99613 913 aaKnown RBP14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 DESI2Q9BSY9 194 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 CARD6Q9BX69 1037 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 AP5M1Q9H0R1 490 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 NDST4Q9H3R1 872 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 C11orf16Q9NQ32 467 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 LZTFL1Q9NQ48 299 aa14.15□□□□□ -0.14
SMARCB1-203ENST00000407082 FRMPD4Q14CM0 1322 aa14.15□□□□□ -0.15
SMARCB1-203ENST00000407082 EPOPA6NHQ4 379 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 DYNC1LI2O43237 492 aaPredicted RBP14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 EDIL3O43854 480 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 TADA3O75528 432 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 PSMC6P62333 389 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 COASYQ13057 564 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 TTLL4Q14679 1199 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 EDRF1Q3B7T1 1238 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 CCDC40Q4G0X9 1142 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 PCNX4Q63HM2 1172 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 TMCO3Q6UWJ1 677 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 KIAA1328Q86T90 577 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 NEK11Q8NG66 645 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 IL31RAQ8NI17 732 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 ZFP91Q96JP5 570 aaPredicted RBP14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 POLR3CQ9BUI4 534 aaPredicted RBP14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 WNT8AQ9H1J5 351 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 DDX41Q9UJV9 622 aaKnown RBP14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 KIAA1024Q9UPX6 916 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 COL4A3BPQ9Y5P4 624 aa14.14□□□□□ -0.15
SMARCB1-203ENST00000407082 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 ZEB2O60315 1214 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 B4GALT4O60513 344 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 EIF3JO75822 258 aaKnown RBP14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 CABYRO75952 493 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 SSBP05455 408 aaKnown RBP eCLIP14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 H2AFXP16104 143 aaPredicted RBP14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 GAP43P17677 238 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 HNRNPH3P31942 346 aaKnown RBP14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 FAM193AP78312 1265 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 MTF1Q14872 753 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 FSCN1Q16658 493 aaKnown RBP14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 ERCC6LQ2NKX8 1250 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 XRRA1Q6P2D8 792 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 STXBP4Q6ZWJ1 553 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 SRGAP1Q7Z6B7 1085 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 GPBP1Q86WP2 473 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 FBXO16Q8IX29 292 aaPredicted RBP14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 SMAP1Q8IYB5 467 aaPredicted RBP14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 LRRC15Q8TF66 581 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 CRYGNQ8WXF5 182 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 DNAJC19Q96DA6 116 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 RPGRIP1Q96KN7 1286 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 CCDC42Q96M95 316 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 WDR24Q96S15 920 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 MRPL44Q9H9J2 332 aaKnown RBP14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 TUFT1Q9NNX1 390 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 VTA1Q9NP79 307 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 MCM3APO60318 1980 aa14.13□□□□□ -0.15
SMARCB1-203ENST00000407082 LOXHD1Q8IVV2 1947 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 CETN3O15182 167 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 CALUO43852 315 aaPredicted RBP14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 STAM2O75886 525 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 ACTN1P12814 892 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 POU3F3P20264 500 aaPredicted RBP14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 MCM3P25205 808 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 RPL13P26373 211 aaKnown RBP14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 MARSP56192 900 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms