RNA–Protein interactions for RNA: ENST00000406921.7

ITSN2-203, Transcript of intersectin 2, humanhuman

TSL 1 (best) BASIC

Gene ITSN2, Length 4,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-203ENST00000406921 LMNB2Q03252 620 aa16.03■□□□□ 0.16
ITSN2-203ENST00000406921 GKAP1Q5VSY0 366 aaPredicted RBP16.03■□□□□ 0.16
ITSN2-203ENST00000406921 HSPBP1Q9NZL4 362 aa16.03■□□□□ 0.16
ITSN2-203ENST00000406921 A8MXQ7 604 aa16.03■□□□□ 0.16
ITSN2-203ENST00000406921 NFRKBQ6P4R8 1299 aa16.03■□□□□ 0.16
ITSN2-203ENST00000406921 NFU1Q9UMS0 254 aa16.03■□□□□ 0.16
ITSN2-203ENST00000406921 MSH4O15457 936 aa16.03■□□□□ 0.16
ITSN2-203ENST00000406921 FXR1P51114 621 aaKnown RBP eCLIP16.03■□□□□ 0.16
ITSN2-203ENST00000406921 ZKSCAN8Q15776 578 aaPredicted RBP16.03■□□□□ 0.16
ITSN2-203ENST00000406921 TEX2Q8IWB9 1127 aa16.03■□□□□ 0.16
ITSN2-203ENST00000406921 UBE4BO95155 1302 aa16.03■□□□□ 0.16
ITSN2-203ENST00000406921 ESYT3A0FGR9 886 aa16.02■□□□□ 0.16
ITSN2-203ENST00000406921 ANXA13P27216 316 aa16.02■□□□□ 0.16
ITSN2-203ENST00000406921 RPA1P27694 616 aa16.02■□□□□ 0.16
ITSN2-203ENST00000406921 ARHGEF18Q6ZSZ5 1173 aa16.02■□□□□ 0.16
ITSN2-203ENST00000406921 GPRC5AQ8NFJ5 357 aa16.02■□□□□ 0.16
ITSN2-203ENST00000406921 MCUR1Q96AQ8 359 aa16.02■□□□□ 0.16
ITSN2-203ENST00000406921 PBKQ96KB5 322 aa16.02■□□□□ 0.16
ITSN2-203ENST00000406921 IFT122Q9HBG6 1241 aa16.02■□□□□ 0.16
ITSN2-203ENST00000406921 GPBP1L1Q9HC44 474 aaPredicted RBP16.02■□□□□ 0.16
ITSN2-203ENST00000406921 NFIBO00712 420 aa16.02■□□□□ 0.16
ITSN2-203ENST00000406921 RNF40O75150 1001 aa16.02■□□□□ 0.16
ITSN2-203ENST00000406921 RHOBTB3O94955 611 aa16.02■□□□□ 0.16
ITSN2-203ENST00000406921 ATXN8OSP0DMR3 200 aa16.02■□□□□ 0.16
ITSN2-203ENST00000406921 IL1R1P14778 569 aa16.02■□□□□ 0.16
ITSN2-203ENST00000406921 TTC7AQ9ULT0 858 aaPredicted RBP16.02■□□□□ 0.16
ITSN2-203ENST00000406921 ZBED1O96006 694 aa16.02■□□□□ 0.15
ITSN2-203ENST00000406921 PSMC1P62191 440 aaKnown RBP16.02■□□□□ 0.15
ITSN2-203ENST00000406921 DR1Q01658 176 aa16.02■□□□□ 0.15
ITSN2-203ENST00000406921 GNASQ5JWF2 1037 aa16.02■□□□□ 0.15
ITSN2-203ENST00000406921 BBOF1Q8ND07 529 aa16.02■□□□□ 0.15
ITSN2-203ENST00000406921 GPRC5CQ9NQ84 441 aa16.02■□□□□ 0.15
ITSN2-203ENST00000406921 FAM114A2Q9NRY5 505 aa16.02■□□□□ 0.15
ITSN2-203ENST00000406921 FER1L4A9Z1Z3 1794 aa16.02■□□□□ 0.15
ITSN2-203ENST00000406921 TYW5A2RUC4 315 aaKnown RBP16.02■□□□□ 0.15
ITSN2-203ENST00000406921 F5H423 210 aaPredicted RBP16.02■□□□□ 0.15
ITSN2-203ENST00000406921 TBX3O15119 743 aa16.02■□□□□ 0.15
ITSN2-203ENST00000406921 HOXA7P31268 230 aaPredicted RBP16.02■□□□□ 0.15
ITSN2-203ENST00000406921 C7orf25Q9BPX7 421 aa16.02■□□□□ 0.15
ITSN2-203ENST00000406921 TARS2Q9BW92 718 aaKnown RBP16.02■□□□□ 0.15
ITSN2-203ENST00000406921 KIF9Q9HAQ2 790 aa16.02■□□□□ 0.15
ITSN2-203ENST00000406921 SLC12A6Q9UHW9 1150 aa16.02■□□□□ 0.15
ITSN2-203ENST00000406921 WNT10BO00744 389 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 ACSL3O95573 720 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 ARP10275 920 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 SLC9A1P19634 815 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 PPP4R1Q8TF05 950 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 PARK7Q99497 189 aaKnown RBP16.01■□□□□ 0.15
ITSN2-203ENST00000406921 IL17RBQ9NRM6 502 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 SCINQ9Y6U3 715 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 FAM205AQ6ZU69 1335 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 RSPH10B2B2RC85 870 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 RSPH10BP0C881 870 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 HOXD10P28358 340 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 TOB1P50616 345 aaPredicted RBP16.01■□□□□ 0.15
ITSN2-203ENST00000406921 BACE1P56817 501 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 ATP11AP98196 1134 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 SLC30A5Q8TAD4 765 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 STMN2Q93045 179 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 SLIT1O75093 1534 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 ZBTB24O43167 697 aaPredicted RBP16.01■□□□□ 0.15
ITSN2-203ENST00000406921 EPHB4P54760 987 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 SEZ6Q53EL9 994 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 MAP3K14Q99558 947 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 NUP85Q9BW27 656 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 DDX47Q9H0S4 455 aaKnown RBP16.01■□□□□ 0.15
ITSN2-203ENST00000406921 SMARCAD1Q9H4L7 1026 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 AGAP1Q9UPQ3 857 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 SNX9Q9Y5X1 595 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 CPP00450 1065 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 EMC2Q15006 297 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 FAM117BQ6P1L5 589 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 CCDC62Q6P9F0 684 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 SCFD2Q8WU76 684 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 CDKL2Q92772 493 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 TUBE1Q9UJT0 475 aa16.01■□□□□ 0.15
ITSN2-203ENST00000406921 ARHGEF28Q8N1W1 1705 aaKnown RBP16■□□□□ 0.15
ITSN2-203ENST00000406921 SMAD1Q15797 465 aaKnown RBP16■□□□□ 0.15
ITSN2-203ENST00000406921 NXNQ6DKJ4 435 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 RAPH1Q70E73 1250 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 ZNF564Q8TBZ8 553 aaPredicted RBP16■□□□□ 0.15
ITSN2-203ENST00000406921 PCDHAC2Q9Y5I4 1007 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 ESYT2A0FGR8 921 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 ARHGEF37A1IGU5 675 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 GSTA1P08263 222 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 GSTA2P09210 222 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 XPAP23025 273 aaPredicted RBP16■□□□□ 0.15
ITSN2-203ENST00000406921 SHMT1P34896 483 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 EFNA5P52803 228 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 TGFB2P61812 414 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 PTPAQ15257 358 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 NTRK3Q16288 839 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 SNRNP35Q16560 246 aaKnown RBP16■□□□□ 0.15
ITSN2-203ENST00000406921 RUNDC3BQ96NL0 473 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 FMO2Q99518 471 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 RIT2Q99578 217 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 MOV10L1Q9BXT6 1211 aaKnown RBP16■□□□□ 0.15
ITSN2-203ENST00000406921 PRDM5Q9NQX1 630 aaPredicted RBP16■□□□□ 0.15
ITSN2-203ENST00000406921 VCAM1P19320 739 aa16■□□□□ 0.15
ITSN2-203ENST00000406921 CLCN6P51797 869 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms