RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 EPN3Q9H201 632 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 NOCTQ9UK39 431 aaKnown RBP10.69□□□□□ -0.7
MSH2-202ENST00000406134 TMCO5BA8MYB1 307 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 PLA2G6O60733 806 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 MDH1P40925 334 aaKnown RBP10.69□□□□□ -0.7
MSH2-202ENST00000406134 PTGER2P43116 358 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 UGCGQ16739 394 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 ZNF568Q3ZCX4 644 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 TTC27Q6P3X3 843 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 ZNF622Q969S3 477 aaKnown RBP eCLIP10.69□□□□□ -0.71e-7■■■□□ 16.2
MSH2-202ENST00000406134 SEL1LQ9UBV2 794 aa10.69□□□□□ -0.7
MSH2-202ENST00000406134 A0A0G2JMZ2 1700 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 LRRC37A2A6NM11 1700 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 KRIT1O00522 736 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 PPFIA2O75334 1257 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 FAM13AO94988 1023 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 PEX5P50542 639 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 MRPS9P82933 396 aaKnown RBP10.68□□□□□ -0.7
MSH2-202ENST00000406134 DGKZQ13574 1117 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 GOLGA6L1Q8N7Z2 621 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 CBWD1Q9BRT8 395 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 WDR11Q9BZH6 1224 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 SLITRK6Q9H5Y7 841 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 ACP6Q9NPH0 428 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 GRHL1Q9NZI5 618 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 HERC5Q9UII4 1024 aaKnown RBP10.68□□□□□ -0.7
MSH2-202ENST00000406134 MYH9P35579 1960 aaKnown RBP10.68□□□□□ -0.7
MSH2-202ENST00000406134 CCDC188H7C350 402 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 PLSCR1O15162 318 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 FGGP02679 453 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 QPCTQ16769 361 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 CEP85LQ5SZL2 805 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 TADA2BQ86TJ2 420 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 EFCAB13Q8IY85 973 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 MYCBPAPQ8TBZ2 947 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 HOOK2Q96ED9 719 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 ADAM7Q9H2U9 754 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 KCND2Q9NZV8 630 aa10.68□□□□□ -0.7
MSH2-202ENST00000406134 TCRBV7S2A1N4TA0A589 114 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 HMGB1P1B2RPK0 211 aaPredicted RBP10.67□□□□□ -0.7
MSH2-202ENST00000406134 TCP10L2B9ZVM9 353 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 SHBGP04278 402 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 ADRB2P07550 413 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 FAM178BQ8IXR5 827 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 ZNF473Q8WTR7 871 aaKnown RBP10.67□□□□□ -0.7
MSH2-202ENST00000406134 TLCD1Q96CP7 247 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 AGBL1Q96MI9 1066 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 KREMEN1Q96MU8 473 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 MXRA8Q9BRK3 442 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 ZNF577Q9BSK1 485 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.67□□□□□ -0.72e-6■□□□□ 10.6
MSH2-202ENST00000406134 ZNF219Q9P2Y4 722 aaPredicted RBP10.67□□□□□ -0.7
MSH2-202ENST00000406134 CHORDC1Q9UHD1 332 aaPredicted RBP10.67□□□□□ -0.7
MSH2-202ENST00000406134 GCOM1H8Y6P7 765 aaPredicted RBP10.67□□□□□ -0.7
MSH2-202ENST00000406134 NFIBO00712 420 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 GAS7O60861 476 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 POLR2MP0CAP2 368 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 ALAS1P13196 640 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 ABCB4P21439 1286 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 ADSSP30520 456 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 MYL7Q01449 175 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 IKQ13123 557 aaPredicted RBP10.67□□□□□ -0.7
MSH2-202ENST00000406134 ZNF211Q13398 564 aaPredicted RBP10.67□□□□□ -0.7
MSH2-202ENST00000406134 ODR4Q5SWX8 454 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 MEX3CQ5U5Q3 659 aaKnown RBP10.67□□□□□ -0.7
MSH2-202ENST00000406134 SEMA4DQ92854 862 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 EMSYQ7Z589 1322 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 CLRN2A0PK11 232 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 ANKRD63C9JTQ0 380 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 IPO5O00410 1097 aaKnown RBP10.67□□□□□ -0.7
MSH2-202ENST00000406134 PAEPP09466 180 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 LMNB1P20700 586 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 INPP5BP32019 993 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 CAP2P40123 477 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 C12orf56Q8IXR9 622 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 GLG1Q92896 1179 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 VCPKMTQ9H867 229 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 TMOD4Q9NZQ9 345 aa10.67□□□□□ -0.7
MSH2-202ENST00000406134 ANK1P16157 1881 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 GRIN3BO60391 1043 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 CTNNA2P26232 953 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 ZNF76P36508 570 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 MAP3K10Q02779 954 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 CC2D2BQ6DHV5 1058 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 NOP9Q86U38 636 aaKnown RBP10.66□□□□□ -0.7
MSH2-202ENST00000406134 LDHDQ86WU2 507 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 TAF4BQ92750 862 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 NACC1Q96RE7 527 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 AGPAT1Q99943 283 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 SH2D3AQ9BRG2 576 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 CARD9Q9H257 536 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 ZNF70Q9UC06 446 aaPredicted RBP10.66□□□□□ -0.7
MSH2-202ENST00000406134 TELO2Q9Y4R8 837 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 ZHX2Q9Y6X8 837 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 ASTN2O75129 1339 aaPredicted RBP10.66□□□□□ -0.7
MSH2-202ENST00000406134 BCRP11274 1271 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 RARRES1P49788 294 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 IFI16Q16666 785 aaKnown RBP10.66□□□□□ -0.7
MSH2-202ENST00000406134 PRELID2Q8N945 189 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms