RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 DACT2Q5SW24 774 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 DNAJC24Q6P3W2 148 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 UBR1Q8IWV7 1749 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 ABCB6Q9NP58 842 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 GFPT2O94808 682 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 LRRC31Q6UY01 552 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 RNF149Q8NC42 400 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 GMCL1P1Q8NEA9 526 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 EIF2AK1Q9BQI3 630 aaKnown RBP12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 ZNF148Q9UQR1 794 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 GPR182O15218 404 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 EYA4O95677 639 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 PRKCBP05771 671 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 ITGA4P13612 1032 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 HERVK_113P62684 666 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 SNCBQ16143 134 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 BZW1Q7L1Q6 419 aaKnown RBP12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 ZNF653Q96CK0 615 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 TNIP3Q96KP6 325 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 PPP1R12CQ9BZL4 782 aa12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 TYW1Q9NV66 732 aaKnown RBP12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF3-204ENST00000405493 PASKQ96RG2 1323 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 ATP1A3P13637 1013 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 LMNB2Q03252 620 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 C2orf54Q08AI8 447 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 KSR1Q8IVT5 923 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 GMCL1Q96IK5 515 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 MXRA8Q9BRK3 442 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 IDI2Q9BXS1 227 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 ANAPC5Q9UJX4 755 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 CLGNO14967 610 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 CABYRO75952 493 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 YWHABP31946 246 aaKnown RBP12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 ZNF484Q5JVG2 852 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 RESP18Q5W5W9 173 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 TTC19Q6DKK2 380 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 TOGARAM2Q6ZUX3 1019 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 PROM2Q8N271 834 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 NHEJ1Q9H9Q4 299 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 ADGRB2O60241 1585 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 ADM5C9JUS6 153 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 CTSHP09668 335 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 RALAP11233 206 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 GCKP35557 465 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 SLC26A2P50443 739 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 ICE2Q659A1 982 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 MOV10L1Q9BXT6 1211 aaKnown RBP12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 UBE2TQ9NPD8 197 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 PRMT7Q9NVM4 692 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 TMEM260Q9NX78 707 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 AFG3L2Q9Y4W6 797 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 SLC16A4O15374 487 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 AKR1A1P14550 325 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 EPHB4P54760 987 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 ANKRD7Q92527 254 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 SYNPO2Q9UMS6 1093 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 H7C0C1 242 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 CD4P01730 458 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 ATP5OP48047 213 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 CCDC38Q502W7 563 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 KCTD16Q68DU8 428 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 DNERQ8NFT8 737 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 PANX2Q96RD6 677 aa12.6□□□□□ -0.39
RAPGEF3-204ENST00000405493 PSMD6Q15008 389 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 SNX17Q15036 470 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 RUNDC3BQ96NL0 473 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 RTFDC1Q9BY42 306 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 VCXQ9H320 206 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 MROH1Q8NDA8 1641 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 USP27XA6NNY8 438 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 TROVE2P10155 538 aaKnown RBP eCLIP12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 FGFR2P21802 821 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 PPARGP37231 505 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 GYS2P54840 703 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 SP3Q02447 781 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 TCP11X2Q5H9J9 407 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 ANKRD20A3Q5VUR7 823 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 BBOF1Q8ND07 529 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 CACYBPQ9HB71 228 aaKnown RBP12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 ESYT2A0FGR8 921 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 SGK1O00141 431 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 RAG1P15918 1043 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 SNX1Q13596 522 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 PHLDB2Q86SQ0 1253 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 COLEC11Q9BWP8 271 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 KCNF1Q9H3M0 494 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 CD58P19256 250 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 RPUSD2Q8IZ73 545 aaKnown RBP12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 DCP1BQ8IZD4 617 aaKnown RBP12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 KIF12Q96FN5 646 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 FAM163AQ96GL9 167 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 SPATC1LQ9H0A9 340 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 ATP11BQ9Y2G3 1177 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 STK38LQ9Y2H1 464 aa12.59□□□□□ -0.39
RAPGEF3-204ENST00000405493 POTEMA6NI47 508 aa12.58□□□□□ -0.39
RAPGEF3-204ENST00000405493 ZMYND10O75800 440 aa12.58□□□□□ -0.39
RAPGEF3-204ENST00000405493 FTCDO95954 541 aa12.58□□□□□ -0.39
RAPGEF3-204ENST00000405493 CXCR5P32302 372 aa12.58□□□□□ -0.39
RAPGEF3-204ENST00000405493 DSG3P32926 999 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms