RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 HIPK3Q9H422 1215 aa17.34■□□□□ 0.37
CDPF1-204ENST00000404744 DENND3A2RUS2 1198 aa17.33■□□□□ 0.37
CDPF1-204ENST00000404744 INO80B-WBP1J3KQ70 363 aa17.33■□□□□ 0.37
CDPF1-204ENST00000404744 STK4Q13043 487 aa17.33■□□□□ 0.37
CDPF1-204ENST00000404744 STIM1Q13586 685 aa17.33■□□□□ 0.37
CDPF1-204ENST00000404744 MORC3Q14149 939 aa17.33■□□□□ 0.37
CDPF1-204ENST00000404744 MAPK6Q16659 721 aa17.33■□□□□ 0.37
CDPF1-204ENST00000404744 ZSCAN23Q3MJ62 389 aa17.33■□□□□ 0.37
CDPF1-204ENST00000404744 L1TD1Q5T7N2 865 aaKnown RBP17.33■□□□□ 0.37
CDPF1-204ENST00000404744 NFKBIZQ9BYH8 718 aa17.33■□□□□ 0.37
CDPF1-204ENST00000404744 TMEM134Q9H6X4 195 aa17.33■□□□□ 0.37
CDPF1-204ENST00000404744 PRDM5Q9NQX1 630 aaPredicted RBP17.33■□□□□ 0.37
CDPF1-204ENST00000404744 PRKAG2Q9UGJ0 569 aa17.33■□□□□ 0.37
CDPF1-204ENST00000404744 MYH11P35749 1972 aa17.33■□□□□ 0.36
CDPF1-204ENST00000404744 SYCE3A1L190 88 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 PITPNM1O00562 1244 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 MYBP10242 640 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 SELPP16109 830 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 EIF4BP23588 611 aaKnown RBP17.32■□□□□ 0.36
CDPF1-204ENST00000404744 PPP1R2P41236 205 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 NLRP12P59046 1061 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 NCBP1Q09161 790 aaKnown RBP17.32■□□□□ 0.36
CDPF1-204ENST00000404744 TMEM132AQ24JP5 1023 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 FAM26DQ5JW98 314 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 CDCA2Q69YH5 1023 aaPredicted RBP17.32■□□□□ 0.36
CDPF1-204ENST00000404744 LRRC8DQ7L1W4 858 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 TMEM161BQ8NDZ6 487 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 FIZ1Q96SL8 496 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 ANP32EQ9BTT0 268 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 PPP1R12CQ9BZL4 782 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 ST6GALNAC4Q9H4F1 302 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 CDHR5Q9HBB8 845 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 IFT122Q9HBG6 1241 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 ARHGAP28Q9P2N2 729 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 DACH1Q9UI36 760 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 GDAQ9Y2T3 454 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 BRCA2P51587 3418 aa17.32■□□□□ 0.36
CDPF1-204ENST00000404744 EIF3DO15371 548 aaKnown RBP eCLIP17.31■□□□□ 0.36
CDPF1-204ENST00000404744 PRPF6O94906 941 aaKnown RBP17.31■□□□□ 0.36
CDPF1-204ENST00000404744 CHRNA1P02708 482 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 DARSP14868 501 aaKnown RBP17.31■□□□□ 0.36
CDPF1-204ENST00000404744 SFPQP23246 707 aaKnown RBP eCLIP17.31■□□□□ 0.36
CDPF1-204ENST00000404744 GTF2BQ00403 316 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 RBL2Q08999 1139 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 MGAT3Q09327 533 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 ZC2HC1CQ53FD0 456 aaPredicted RBP17.31■□□□□ 0.36
CDPF1-204ENST00000404744 IFNLR1Q8IU57 520 aaPredicted RBP17.31■□□□□ 0.36
CDPF1-204ENST00000404744 MYOCDQ8IZQ8 938 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 SYCP3Q8IZU3 236 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 KIAA0895Q8NCT3 520 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 HVCN1Q96D96 273 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 ACCSQ96QU6 501 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 NOC4LQ9BVI4 516 aaKnown RBP17.31■□□□□ 0.36
CDPF1-204ENST00000404744 TMEM206Q9H813 350 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 PRMT7Q9NVM4 692 aaPredicted RBP17.31■□□□□ 0.36
CDPF1-204ENST00000404744 ANO10Q9NW15 660 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 EXOC7Q9UPT5 735 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 RPS6KA5O75582 802 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 ERLIN2O94905 339 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 PRKCBP05771 671 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 CCDC192P0DO97 292 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 CASP5P51878 434 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 CATSPER4Q7RTX7 472 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 SMYD4Q8IYR2 804 aaPredicted RBP17.31■□□□□ 0.36
CDPF1-204ENST00000404744 MLKLQ8NB16 471 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 BICD1Q96G01 975 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 FGFBP2Q9BYJ0 223 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 TBX20Q9UMR3 447 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 MAPK8IP1Q9UQF2 711 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 UBE4BO95155 1302 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 ADGRA3Q8IWK6 1321 aa17.31■□□□□ 0.36
CDPF1-204ENST00000404744 EVI5O60447 810 aa17.3■□□□□ 0.36
CDPF1-204ENST00000404744 CSDE1O75534 798 aaKnown RBP17.3■□□□□ 0.36
CDPF1-204ENST00000404744 PARNO95453 639 aaKnown RBP17.3■□□□□ 0.36
CDPF1-204ENST00000404744 RAG1P15918 1043 aa17.3■□□□□ 0.36
CDPF1-204ENST00000404744 MBTD1Q05BQ5 628 aa17.3■□□□□ 0.36
CDPF1-204ENST00000404744 PCBP1Q15365 356 aaKnown RBP eCLIP17.3■□□□□ 0.36
CDPF1-204ENST00000404744 STX1AQ16623 288 aa17.3■□□□□ 0.36
CDPF1-204ENST00000404744 NELFCDQ8IXH7 590 aa17.3■□□□□ 0.36
CDPF1-204ENST00000404744 USP38Q8NB14 1042 aa17.3■□□□□ 0.36
CDPF1-204ENST00000404744 ZNF507Q8TCN5 953 aa17.3■□□□□ 0.36
CDPF1-204ENST00000404744 SCFD1Q8WVM8 642 aa17.3■□□□□ 0.36
CDPF1-204ENST00000404744 DPF3Q92784 378 aa17.3■□□□□ 0.36
CDPF1-204ENST00000404744 TBX21Q9UL17 535 aa17.3■□□□□ 0.36
CDPF1-204ENST00000404744 SQORQ9Y6N5 450 aa17.3■□□□□ 0.36
CDPF1-204ENST00000404744 GPR182O15218 404 aa17.29■□□□□ 0.36
CDPF1-204ENST00000404744 GHRP10912 638 aa17.29■□□□□ 0.36
CDPF1-204ENST00000404744 PRCPP42785 496 aa17.29■□□□□ 0.36
CDPF1-204ENST00000404744 CCL23P55773 120 aa17.29■□□□□ 0.36
CDPF1-204ENST00000404744 TYRO3Q06418 890 aa17.29■□□□□ 0.36
CDPF1-204ENST00000404744 NFX1Q12986 1120 aaKnown RBP17.29■□□□□ 0.36
CDPF1-204ENST00000404744 PRPF4BQ13523 1007 aaKnown RBP17.29■□□□□ 0.36
CDPF1-204ENST00000404744 EPM2AIP1Q7L775 607 aaPredicted RBP17.29■□□□□ 0.36
CDPF1-204ENST00000404744 C7orf61Q8IZ16 206 aa17.29■□□□□ 0.36
CDPF1-204ENST00000404744 GUF1Q8N442 669 aaKnown RBP17.29■□□□□ 0.36
CDPF1-204ENST00000404744 GLIS3Q8NEA6 775 aa17.29■□□□□ 0.36
CDPF1-204ENST00000404744 PRIMPOLQ96LW4 560 aa17.29■□□□□ 0.36
CDPF1-204ENST00000404744 MRPL4Q9BYD3 311 aaKnown RBP17.29■□□□□ 0.36
CDPF1-204ENST00000404744 FZD8Q9H461 694 aa17.29■□□□□ 0.36
CDPF1-204ENST00000404744 MINDY3Q9H8M7 445 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms