RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ZNF277Q9NRM2 450 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 ZIM2Q9NZV7 527 aa6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 INVSQ9Y283 1065 aa6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 GOLGA3Q08378 1498 aa6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 CARMIL1Q5VZK9 1371 aa6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 ABLIM3O94929 683 aa6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 HMGCRP04035 888 aa6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 C5AR1P21730 350 aa6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 ETV4P43268 484 aa6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 SPIDRQ14159 915 aa6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 NFE2Q16621 373 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 CIAPIN1Q6FI81 312 aa6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 TSR2Q969E8 191 aaKnown RBP6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 KATNBL1Q9H079 304 aa6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 ZDHHC9Q9Y397 364 aa6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 MRFAP1Q9Y605 127 aa6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 RAPGEF2Q9Y4G8 1499 aa6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 CTTNBP2Q8WZ74 1663 aa6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 FHAD1B1AJZ9 1412 aa6.57□□□□□ -1.36
HMGB3P19-201ENST00000403971 MAFGO15525 162 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 MARCH6O60337 910 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 ZRANB2O95218 330 aaKnown RBP eCLIP6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 SCGB1D2O95969 90 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 MTHFD2P13995 350 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 CSF2RBP32927 897 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 RECQLP46063 649 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 SLURP1P55000 103 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 KRT85P78386 507 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 CD69Q07108 199 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 MGAT5Q09328 741 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 PCOLCEQ15113 449 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 EFCAB2Q5VUJ9 269 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 TCERG1LQ5VWI1 586 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 TRIM68Q6AZZ1 485 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 FMNL3Q8IVF7 1028 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 IFNL2Q8IZJ0 200 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 NKD2Q969F2 451 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 AJUBAQ96IF1 538 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 WDR92Q96MX6 357 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 RHOBTB2Q9BYZ6 727 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 CDH19Q9H159 772 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 LUC7LQ9NQ29 371 aaKnown RBP6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 TCEAL9Q9UHQ7 104 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 TUBD1Q9UJT1 453 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 ZNF180Q9UJW8 692 aa6.56□□□□□ -1.36
HMGB3P19-201ENST00000403971 SYNJ2O15056 1496 aa6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 SNAPC4Q5SXM2 1469 aa6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 SEC24DO94855 1032 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 ZSCAN20P17040 1043 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 GPR15P49685 360 aa6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 ADAM15Q13444 863 aa6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 PPP2R5AQ15172 486 aa6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 MBNL2Q5VZF2 373 aaKnown RBP6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 TMEM151BQ8IW70 566 aa6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 CMTR2Q8IYT2 770 aaKnown RBP6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 RTKN2Q8IZC4 609 aa6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 CPA6Q8N4T0 437 aa6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 RSAD2Q8WXG1 361 aa6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 JPH3Q8WXH2 748 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 MBD6Q96DN6 1003 aa6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 ACE2Q9BYF1 805 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 DMRT3Q9NQL9 472 aa6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 CHPF2Q9P2E5 772 aa6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 ADAM29Q9UKF5 820 aa6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 NOB1Q9ULX3 412 aaKnown RBP6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 SYNPO2Q9UMS6 1093 aa6.55□□□□□ -1.36
HMGB3P19-201ENST00000403971 CHD1O14646 1710 aa6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 NDUFS2O75306 463 aa6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 LY86O95711 162 aa6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 XPAP23025 273 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 CFPP27918 469 aa6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 MRE11P49959 708 aa6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 SLC5A3P53794 718 aa6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 ADRM1Q16186 407 aa6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 FAM26FQ5R3K3 315 aa6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 REXO1L1PQ8IX06 675 aa6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 LRRC56Q8IYG6 542 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 KLHL36Q8N4N3 616 aa6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 PIK3C3Q8NEB9 887 aa6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 PPP1R14CQ8TAE6 165 aa6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 CARD11Q9BXL7 1154 aa6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 BARX1Q9HBU1 254 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 FAM184BQ9ULE4 1060 aa6.54□□□□□ -1.36
HMGB3P19-201ENST00000403971 PRPF3O43395 683 aaKnown RBP6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 TSPAN6O43657 245 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 NRP2O60462 931 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 TMEM127O75204 238 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 PF4V1P10720 104 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 TXKP42681 527 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 MEOX1P50221 254 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 USP10Q14694 798 aaKnown RBP6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 ACAP1Q15027 740 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 TBR1Q16650 682 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 TMEM240Q5SV17 173 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 KLHDC10Q6PID8 442 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 LMBR1LQ6UX01 489 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 C1QL4Q86Z23 238 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 GLB1L2Q8IW92 636 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 TPH2Q8IWU9 490 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 SYT8Q8NBV8 401 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms