RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 A0A0G2JNJ9 132 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 A0A1B0GTL3 188 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 H0Y858 1186 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 DDX3XO00571 662 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 CTNND1O60716 968 aaKnown RBP5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 TMEM127O75204 238 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 SEC24DO94855 1032 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 PI3P19957 117 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 ADSLP30566 484 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 RRADP55042 308 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 ACAP1Q15027 740 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 ABHD15Q6UXT9 468 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 DPP8Q6V1X1 898 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 LARP4Q71RC2 724 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 BMP8AQ7Z5Y6 402 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 FAM129CQ86XR2 697 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 LINC00482Q8N8I6 264 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 FBXO15Q8NCQ5 510 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 FNIP1Q8TF40 1166 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 ZNF526Q8TF50 670 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 HPS3Q969F9 1004 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 RELTQ969Z4 430 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 SPATA25Q9BR10 227 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 ADI1Q9BV57 179 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 CHMP4AQ9BY43 222 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 Q9UFV3 132 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 PTPN22Q9Y2R2 807 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 IPPQ9Y573 584 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 PCDHA13Q9Y5I0 950 aa5.02□□□□□ -1.61
HMGB1P17-201ENST00000403495 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 LRRC14BA6NHZ5 514 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 CUTAO60888 179 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 SEMA7AO75326 666 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 LY86O95711 162 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 VCAM1P19320 739 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 XPAP23025 273 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 AKAP5P24588 427 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 IL13P35225 146 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 MCAMP43121 646 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 RHBDL3P58872 404 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 MAP3K12Q12852 859 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 ADAM15Q13444 863 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 SEPT2Q15019 361 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 MUM1L1Q5H9M0 696 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 ATAT1Q5SQI0 421 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 TMEM200BQ69YZ2 307 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 LMBR1LQ6UX01 489 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 BTNL9Q6UXG8 535 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 USP45Q70EL2 814 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 GPR155Q7Z3F1 870 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 TTLL6Q8N841 843 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 PIK3C3Q8NEB9 887 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 FBXO18Q8NFZ0 1043 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 SSH1Q8WYL5 1049 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 FATE1Q969F0 183 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 MVB12AQ96EY5 273 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 MAP3K14Q99558 947 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 HAPLN2Q9GZV7 340 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 KIAA1683Q9H0B3 1180 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 SAE1Q9UBE0 346 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 SCOCQ9UIL1 159 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 RCAN3Q9UKA8 241 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 IRAK3Q9Y616 596 aa5.01□□□□□ -1.61
HMGB1P17-201ENST00000403495 APAF1O14727 1248 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 AKR1B10O60218 316 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 PRAMEF4O60810 478 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 KLHL18O94889 574 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 ALDH2P05091 517 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 MYL1P05976 194 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 ZNF28P17035 718 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 SLC16A1P53985 500 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 DLX2Q07687 328 aaPredicted RBP5□□□□□ -1.61
HMGB1P17-201ENST00000403495 GBX1Q14549 363 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 VMACQ2NL98 169 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 PRR31Q5SQ13 230 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 IL31Q6EBC2 164 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 SYDE1Q6ZW31 735 aaPredicted RBP5□□□□□ -1.61
HMGB1P17-201ENST00000403495 OVCH2Q7RTZ1 564 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 GLB1L2Q8IW92 636 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 ZDHHC14Q8IZN3 488 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 CAMKK1Q8N5S9 505 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 MSL3Q8N5Y2 521 aaKnown RBP5□□□□□ -1.61
HMGB1P17-201ENST00000403495 RSAD2Q8WXG1 361 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 PMM1Q92871 262 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 NKD2Q969F2 451 aaPredicted RBP5□□□□□ -1.61
HMGB1P17-201ENST00000403495 SIGLEC10Q96LC7 697 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 WDR92Q96MX6 357 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 PWWP2AQ96N64 755 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 LDAHQ9H6V9 325 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 GREM2Q9H772 168 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 PRDM11Q9NQV5 511 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 FAM53CQ9NYF3 392 aa5□□□□□ -1.61
HMGB1P17-201ENST00000403495 A0A1W2PR48 441 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 ERC2O15083 957 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 ADCY6O43306 1168 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 HMGCRP04035 888 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 ZNF888P0CJ79 500 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 U2AF1L5P0DN76 240 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 GAAP10253 952 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms