RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 PRPF6O94906 941 aaKnown RBP17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ARP10275 920 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 CYP11B2P19099 503 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ICAM3P32942 547 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 CCL14Q16627 93 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 HAUS3Q68CZ6 603 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 NFRKBQ6P4R8 1299 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 AFAP1L1Q8TED9 768 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 GJA10Q969M2 543 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 CDHR1Q96JP9 859 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 FAM20AQ96MK3 541 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 STK24Q9Y6E0 443 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 CASP8AP2Q9UKL3 1982 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 POTEB3A0JP26 581 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 MYBL2P10244 700 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 GLE1Q53GS7 698 aaKnown RBP17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 POTEBQ6S5H4 581 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ERMNQ8TAM6 284 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 SCFD1Q8WVM8 642 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 TLR10Q9BXR5 811 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 KATNBL1Q9H079 304 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ABHD16BQ9H3Z7 469 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 VTA1Q9NP79 307 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 NLRC4Q9NPP4 1024 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 TBC1D7Q9P0N9 293 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 CETN3O15182 167 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 KRT18P05783 430 aaKnown RBP17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 TGFB3P10600 412 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 TNFRSF8P28908 595 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 POLR2FP61218 127 aaKnown RBP17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 KLHDC7AQ5VTJ3 777 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 EEPD1Q7L9B9 569 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 NELFCDQ8IXH7 590 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 LRRC1Q9BTT6 524 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 FGFBP2Q9BYJ0 223 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 AGO4Q9HCK5 861 aaKnown RBP17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 SALL4Q9UJQ4 1053 aa17.37■□□□□ 0.37
CHRFAM7A-203ENST00000401522 MCM3APO60318 1980 aa17.36■□□□□ 0.37
CHRFAM7A-203ENST00000401522 IPO5O00410 1097 aaKnown RBP17.36■□□□□ 0.37
CHRFAM7A-203ENST00000401522 SLC12A3P55017 1021 aa17.36■□□□□ 0.37
CHRFAM7A-203ENST00000401522 RAD51AP2Q09MP3 1159 aa17.36■□□□□ 0.37
CHRFAM7A-203ENST00000401522 NAB2Q15742 525 aa17.36■□□□□ 0.37
CHRFAM7A-203ENST00000401522 KCNV1Q6PIU1 500 aa17.36■□□□□ 0.37
CHRFAM7A-203ENST00000401522 SEPT14Q6ZU15 432 aa17.36■□□□□ 0.37
CHRFAM7A-203ENST00000401522 OTOP1Q7RTM1 612 aa17.36■□□□□ 0.37
CHRFAM7A-203ENST00000401522 GSPT2Q8IYD1 628 aaKnown RBP17.36■□□□□ 0.37
CHRFAM7A-203ENST00000401522 TRIB2Q92519 343 aa17.36■□□□□ 0.37
CHRFAM7A-203ENST00000401522 SLC5A5Q92911 643 aa17.36■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ZNF577Q9BSK1 485 aa17.36■□□□□ 0.37
CHRFAM7A-203ENST00000401522 AIPL1Q9NZN9 384 aa17.36■□□□□ 0.37
CHRFAM7A-203ENST00000401522 KIAA1217Q5T5P2 1943 aa17.36■□□□□ 0.37
CHRFAM7A-203ENST00000401522 NPHP3-ACAD11A0A0J9YXS1 232 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 RBM47A0AV96 593 aaKnown RBP17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 GOLGA6BA6NDN3 693 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 MED24O75448 989 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 HSPA8P11142 646 aaKnown RBP17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 GGCXP38435 758 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ADAM9Q13443 819 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 SLC18A3Q16572 532 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 CFAP221Q4G0U5 840 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 TAPT1Q6NXT6 567 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 FBXO16Q8IX29 292 aaPredicted RBP17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 PXYLP1Q8TE99 480 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 RIT2Q99578 217 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 TSPYL1Q9H0U9 437 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 STIM2Q9P246 746 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 NCK2O43639 380 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ATP9AO75110 1047 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 EPHB4P54760 987 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 NAP1L1P55209 391 aaKnown RBP17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ACVR2BQ13705 512 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ASIC2Q16515 512 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ARSHQ5FYA8 562 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 EMBQ6PCB8 327 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 SENP7Q9BQF6 1050 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 GANQ9H2C0 597 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 TRIM17Q9Y577 477 aa17.35■□□□□ 0.37
CHRFAM7A-203ENST00000401522 GRID2IPA4D2P6 1211 aa17.34■□□□□ 0.37
CHRFAM7A-203ENST00000401522 DHX15O43143 795 aaKnown RBP17.34■□□□□ 0.37
CHRFAM7A-203ENST00000401522 PSMD10O75832 226 aa17.34■□□□□ 0.37
CHRFAM7A-203ENST00000401522 HSPA1AP0DMV8 641 aaKnown RBP17.34■□□□□ 0.37
CHRFAM7A-203ENST00000401522 HSPA1BP0DMV9 641 aaKnown RBP17.34■□□□□ 0.37
CHRFAM7A-203ENST00000401522 RAPGEF1Q13905 1077 aa17.34■□□□□ 0.37
CHRFAM7A-203ENST00000401522 CCDC62Q6P9F0 684 aa17.34■□□□□ 0.37
CHRFAM7A-203ENST00000401522 FRMD5Q7Z6J6 570 aa17.34■□□□□ 0.37
CHRFAM7A-203ENST00000401522 RAET1EQ8TD07 263 aa17.34■□□□□ 0.37
CHRFAM7A-203ENST00000401522 SCFD2Q8WU76 684 aa17.34■□□□□ 0.37
CHRFAM7A-203ENST00000401522 TBC1D22BQ9NU19 505 aa17.34■□□□□ 0.37
CHRFAM7A-203ENST00000401522 DMGDHQ9UI17 866 aaKnown RBP17.34■□□□□ 0.37
CHRFAM7A-203ENST00000401522 AGPSO00116 658 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 BUB1O43683 1085 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ADCY3O60266 1144 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 KCNA2P16389 499 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 CXCR5P32302 372 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 CTCFP49711 727 aaPredicted RBP17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 SP2Q02086 613 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 SPIRE1Q08AE8 756 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 KLHL30Q0D2K2 578 aa17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ITGB3BPQ13352 177 aaPredicted RBP17.33■□□□□ 0.37
CHRFAM7A-203ENST00000401522 NNTQ13423 1086 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms