RNA–Protein interactions for RNA: ENST00000400790.3

ARID1B-204, Transcript of AT-rich interaction domain 1B, human

TSL 3

Gene ARID1B, Length 2,887 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1B-204	ENST00000400790	TLCD1	Q96CP7	247 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	NGLY1	Q96IV0	654 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	DPH5	Q9H2P9	285 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	BCAS3	Q9H6U6	928 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	CNOT10	Q9H9A5	744 aa	Known RBP	13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	ACTR5	Q9H9F9	607 aa	Predicted RBP	13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	TUFT1	Q9NNX1	390 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	ANKRD31	Q8N7Z5	1873 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	GOLGA6L10	A0A0M3HER8	536 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	EML1	O00423	815 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	RAB27A	P51159	221 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	SLC8A3	P57103	927 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	SNCB	Q16143	134 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	FAM182B	Q5T319	152 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	DUPD1	Q68J44	220 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	CCDC121	Q6ZUS5	278 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	C1orf186	Q6ZWK4	172 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	SIAH1	Q8IUQ4	282 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	CCDC13	Q8IYE1	715 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	RAPGEF5	Q92565	580 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	PSMD1	Q99460	953 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	HSD17B14	Q9BPX1	270 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	GPR88	Q9GZN0	384 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	ATP6V0A4	Q9HBG4	840 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	RGL1	Q9NZL6	768 aa		13.44	□□□□□ -0.26
ARID1B-204	ENST00000400790	FAM187A	A6NFU0	413 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	SFI1	A8K8P3	1242 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	CDR1	P51861	262 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	DRG2	P55039	364 aa	Known RBP	13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	FAM228A	Q86W67	206 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	ZFPM1	Q8IX07	1006 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	MYCT1	Q8N699	235 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	GMCL1P1	Q8NEA9	526 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	CENPT	Q96BT3	561 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	GMCL1	Q96IK5	515 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	ERP44	Q9BS26	406 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	TRIM51	Q9BSJ1	452 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	PARVG	Q9HBI0	331 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	SLC40A1	Q9NP59	571 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	PI4KB	Q9UBF8	816 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	SEL1L	Q9UBV2	794 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	NR2E1	Q9Y466	385 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	IGSF9B	Q9UPX0	1349 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	NRXN2	Q9P2S2	1712 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	ANKRD62	A6NC57	917 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790		F5H6K3	240 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	NMT1	P30419	496 aa	Known RBP	13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	HADHB	P55084	474 aa	Known RBP	13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	DR1	Q01658	176 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	KLRC3	Q07444	240 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	MTA1	Q13330	715 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	DHX34	Q14147	1143 aa	Known RBP	13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	PDCD2	Q16342	344 aa	Predicted RBP	13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	USH1G	Q495M9	461 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	RPUSD2	Q8IZ73	545 aa	Known RBP	13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	C8orf37	Q96NL8	207 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	ZDHHC18	Q9NUE0	388 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	DMAC2	Q9NW81	257 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	APEX2	Q9UBZ4	518 aa		13.43	□□□□□ -0.26
ARID1B-204	ENST00000400790	PIK3CD	O00329	1044 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	NUDT17	P0C025	328 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	ABCB4	P21439	1286 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	TNFAIP3	P21580	790 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	POLD1	P28340	1107 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	ZNF76	P36508	570 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	IFFO1	Q0D2I5	559 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	QPCT	Q16769	361 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	SYDE2	Q5VT97	1194 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	TATDN1	Q6P1N9	297 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	HOOK3	Q86VS8	718 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	CYP2W1	Q8TAV3	490 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	SEC16B	Q96JE7	1060 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	FIZ1	Q96SL8	496 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	LRRC4B	Q9NT99	713 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	FRMD4B	Q9Y2L6	1034 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	ATP8A1	Q9Y2Q0	1164 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	IGLV3-22	A0A075B6J6	115 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	DCDC2C	A8MYV0	355 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	OPLAH	O14841	1288 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	RFX1	P22670	979 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	CBWD6	Q4V339	395 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	CBWD3	Q5JTY5	395 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	CBWD5	Q5RIA9	395 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	TMEM179	Q6ZVK1	233 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	STXBP4	Q6ZWJ1	553 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	HS2ST1	Q7LGA3	356 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	ZNF720	Q7Z2F6	126 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	CACNA2D3	Q8IZS8	1091 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	MAB21L3	Q8N8X9	362 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	PIGO	Q8TEQ8	1089 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	P3H4	Q92791	437 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	ZDHHC15	Q96MV8	337 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	SCLT1	Q96NL6	688 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	SLITRK3	O94933	977 aa		13.42	□□□□□ -0.26
ARID1B-204	ENST00000400790	TRIM37	O94972	964 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms