RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 ZBTB48P10074 688 aaPredicted RBP9.35□□□□□ -0.91
RETREG1-202ENST00000399793 COL6A2P12110 1019 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 TAC1P20366 129 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 FGFR4P22455 802 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 GTF2H1P32780 548 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 DSG1Q02413 1049 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 AIMP1Q12904 312 aaKnown RBP9.35□□□□□ -0.91
RETREG1-202ENST00000399793 PTGDRQ13258 359 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 PPP2R5CQ13362 524 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 ITGA9Q13797 1035 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 TMEM67Q5HYA8 995 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 DUPD1Q68J44 220 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 MAGEB18Q96M61 343 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 ECSITQ9BQ95 431 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 SUGT1Q9Y2Z0 365 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 SNX24Q9Y343 169 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 SLC12A7Q9Y666 1083 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 DISP2A7MBM2 1401 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 VILLO15195 856 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 FOXN2P32314 431 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 CCR3P51677 355 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 MAP3K10Q02779 954 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 NEXNQ0ZGT2 675 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 SLC9C1Q4G0N8 1177 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 MFSD5Q6N075 450 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 ZDHHC24Q6UX98 284 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 GIMAP8Q8ND71 665 aaPredicted RBP9.35□□□□□ -0.91
RETREG1-202ENST00000399793 P2RX5Q93086 422 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 TIMMDC1Q9NPL8 285 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 NDUFA13Q9P0J0 144 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 NR2E1Q9Y466 385 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 FMN2Q9NZ56 1722 aa9.35□□□□□ -0.91
RETREG1-202ENST00000399793 ALKQ9UM73 1620 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 A0A087X0T9 212 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 TMEM110-MUSTN1A8MSY1 372 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 KLRC4O43908 158 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 DCTN3O75935 186 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 DEXIO95424 95 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 FAM228BP0C875 321 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 CCNE1P24864 410 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 SERPINB8P50452 374 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 BCL2A1Q16548 175 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 LONRF1Q17RB8 773 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 C3orf62Q6ZUJ4 267 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 SGMS1Q86VZ5 419 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 ZBED8Q8IZ13 594 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 ZCRB1Q8TBF4 217 aaKnown RBP9.34□□□□□ -0.91
RETREG1-202ENST00000399793 TMEM87BQ96K49 555 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 FNBP1Q96RU3 617 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 ERP44Q9BS26 406 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 POLR3CQ9BUI4 534 aaPredicted RBP9.34□□□□□ -0.91
RETREG1-202ENST00000399793 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.34□□□□□ -0.91
RETREG1-202ENST00000399793 USP29Q9HBJ7 922 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 SPTLC1O15269 473 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 ZNF862O60290 1169 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 TLR2O60603 784 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 BMP15O95972 392 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 POLR2FP61218 127 aaKnown RBP9.34□□□□□ -0.91
RETREG1-202ENST00000399793 TAF1BQ53T94 588 aaPredicted RBP9.34□□□□□ -0.91
RETREG1-202ENST00000399793 RBM44Q6ZP01 1051 aaKnown RBP9.34□□□□□ -0.91
RETREG1-202ENST00000399793 TRIM11Q96F44 468 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 PHF12Q96QT6 1004 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 PYM1Q9BRP8 204 aaKnown RBP9.34□□□□□ -0.91
RETREG1-202ENST00000399793 STK33Q9BYT3 514 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 PUS7LQ9H0K6 701 aaKnown RBP9.34□□□□□ -0.91
RETREG1-202ENST00000399793 EPB41L1Q9H4G0 881 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 PITPNM2Q9BZ72 1349 aa9.34□□□□□ -0.91
RETREG1-202ENST00000399793 RIPK2O43353 540 aa9.34□□□□□ -0.92
RETREG1-202ENST00000399793 ATP2C1P98194 919 aaPredicted RBP9.34□□□□□ -0.92
RETREG1-202ENST00000399793 DR1Q01658 176 aa9.34□□□□□ -0.92
RETREG1-202ENST00000399793 FKBP4Q02790 459 aaKnown RBP eCLIP9.34□□□□□ -0.92
RETREG1-202ENST00000399793 TCIRG1Q13488 830 aa9.34□□□□□ -0.92
RETREG1-202ENST00000399793 KIF22Q14807 665 aa9.34□□□□□ -0.92
RETREG1-202ENST00000399793 SLC18A3Q16572 532 aa9.34□□□□□ -0.92
RETREG1-202ENST00000399793 PDCD4Q53EL6 469 aaKnown RBP9.34□□□□□ -0.92
RETREG1-202ENST00000399793 UNC13DQ70J99 1090 aa9.34□□□□□ -0.92
RETREG1-202ENST00000399793 C14orf80Q86SX3 495 aa9.34□□□□□ -0.92
RETREG1-202ENST00000399793 CCDC84Q86UT8 332 aaPredicted RBP9.34□□□□□ -0.92
RETREG1-202ENST00000399793 RASGEF1CQ8N431 466 aa9.34□□□□□ -0.92
RETREG1-202ENST00000399793 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.34□□□□□ -0.92
RETREG1-202ENST00000399793 SHISA4Q96DD7 197 aa9.34□□□□□ -0.92
RETREG1-202ENST00000399793 EIF2AQ9BY44 585 aaKnown RBP9.34□□□□□ -0.92
RETREG1-202ENST00000399793 EBF3Q9H4W6 596 aa9.34□□□□□ -0.92
RETREG1-202ENST00000399793 USP40Q9NVE5 1235 aa9.34□□□□□ -0.92
RETREG1-202ENST00000399793 RTCBQ9Y3I0 505 aaKnown RBP9.34□□□□□ -0.92
RETREG1-202ENST00000399793 TMEM131LA2VDJ0 1609 aa9.33□□□□□ -0.92
RETREG1-202ENST00000399793 MYPNQ86TC9 1320 aa9.33□□□□□ -0.92
RETREG1-202ENST00000399793 EXOC3O60645 756 aa9.33□□□□□ -0.92
RETREG1-202ENST00000399793 SERPING1P05155 500 aa9.33□□□□□ -0.92
RETREG1-202ENST00000399793 BRAFP15056 766 aa9.33□□□□□ -0.92
RETREG1-202ENST00000399793 COPB2P35606 906 aa9.33□□□□□ -0.92
RETREG1-202ENST00000399793 IL17AQ16552 155 aa9.33□□□□□ -0.92
RETREG1-202ENST00000399793 Q6ZNX1 250 aa9.33□□□□□ -0.92
RETREG1-202ENST00000399793 CRACR2BQ8N4Y2 399 aaPredicted RBP9.33□□□□□ -0.92
RETREG1-202ENST00000399793 GLG1Q92896 1179 aa9.33□□□□□ -0.92
RETREG1-202ENST00000399793 LGR6Q9HBX8 967 aa9.33□□□□□ -0.92
RETREG1-202ENST00000399793 TCP11L1Q9NUJ3 509 aa9.33□□□□□ -0.92
RETREG1-202ENST00000399793 ADAMTS1Q9UHI8 967 aa9.33□□□□□ -0.92
RETREG1-202ENST00000399793 TSC22D4Q9Y3Q8 395 aa9.33□□□□□ -0.92
RETREG1-202ENST00000399793 FADS3Q9Y5Q0 445 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms