RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 TADA2BQ86TJ2 420 aa11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 RAB42Q8N4Z0 105 aa11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 ARHGAP45Q92619 1136 aa11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 USP28Q96RU2 1077 aa11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 TOPORSQ9NS56 1045 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 SERPINB13Q9UIV8 391 aa11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 KCNJ14Q9UNX9 436 aa11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 TADA2AO75478 443 aa11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 PUDPQ08623 228 aa11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 C9orf131Q5VYM1 1079 aa11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 RASSF3Q86WH2 238 aa11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 HORMAD1Q86X24 394 aa11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 ANKRD44Q8N8A2 993 aa11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 HEXIM2Q96MH2 286 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 TDRD3Q9H7E2 651 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 RAVER2Q9HCJ3 691 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 PANK4Q9NVE7 773 aa11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 PRR12Q9ULL5 1215 aa11.84□□□□□ -0.51
CACNA1C-217ENST00000399641 TMEM2Q9UHN6 1383 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 P4HA2O15460 535 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 CD58P19256 250 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 COPB2P35606 906 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 SOAT1P35610 550 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 RAD51Q06609 339 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 BBS9Q3SYG4 887 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 C1orf146Q5VVC0 180 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 WDR75Q8IWA0 830 aaKnown RBP11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 IPCEF1Q8WWN9 437 aaPredicted RBP11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 ASPSCR1Q9BZE9 553 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 BRD8Q9H0E9 1235 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 PDE11AQ9HCR9 933 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 GALNT8Q9NY28 637 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 ZMYND8Q9ULU4 1186 aaPredicted RBP11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 UBA6A0AVT1 1052 aaPredicted RBP11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 USP17L10C9JJH3 530 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 FEN1P39748 380 aaKnown RBP11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 AK2P54819 239 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 LRRC36Q1X8D7 754 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 ASIC4Q96FT7 647 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 PDCD10Q9BUL8 212 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 USP26Q9BXU7 913 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 NCOA5Q9HCD5 579 aaKnown RBP11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 ASB14A6NK59 587 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 CTSHP09668 335 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 TAF5Q15542 800 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 POTEEQ6S8J3 1075 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 CCDC81Q6ZN84 652 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 TBC1D1Q86TI0 1168 aaPredicted RBP11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 DIS3L2Q8IYB7 885 aaKnown RBP11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 FAM129BQ96TA1 746 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 NFIBO00712 420 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 RASSF7Q02833 373 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 ASPRV1Q53RT3 343 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 RASGRF2O14827 1237 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 CETPP11597 493 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 ARL4AP40617 200 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 NSFP46459 744 aaKnown RBP11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 MAP3K10Q02779 954 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 KRT73Q86Y46 540 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 PCIF1Q9H4Z3 704 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 MSRAQ9UJ68 235 aa11.83□□□□□ -0.52
CACNA1C-217ENST00000399641 RPS6KA4O75676 772 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 PCCAP05165 728 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 CXCR5P32302 372 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 CACNB3P54284 484 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 DEUP1Q05D60 604 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 CACNB2Q08289 660 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 GLYCTKQ8IVS8 523 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 TRIM42Q8IWZ5 723 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 EEF2KMTQ96G04 330 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 SPATA33Q96N06 139 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 KIFC1Q9BW19 673 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 KATNAL1Q9BW62 490 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 GREM2Q9H772 168 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 LSM7Q9UK45 103 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 COL4A3BPQ9Y5P4 624 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 ARAP3Q8WWN8 1544 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 TAC1P20366 129 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 SPP2Q13103 211 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 SLC10A5Q5PT55 438 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 SMC5Q8IY18 1101 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 NUDT12Q9BQG2 462 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 XRCC5P13010 732 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 PHKA2P46019 1235 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 EFTUD2Q15029 972 aaKnown RBP eCLIP11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 SPATA1Q5VX52 437 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 OR6B2Q6IFH4 312 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 GPKOWQ92917 476 aaPredicted RBP eCLIP11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 OTUB1Q96FW1 271 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 TUFT1Q9NNX1 390 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 GDAQ9Y2T3 454 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 A0A087WUV0 522 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 MED7O43513 233 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 STAT1P42224 750 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 EIF2B5Q13144 721 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 MED21Q13503 144 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 ANKRD13CQ8N6S4 541 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 NUP58Q9BVL2 599 aa11.82□□□□□ -0.52
CACNA1C-217ENST00000399641 GCOM2Q9BZD3 368 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms