RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 SYCE1LA8MT33 242 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 TRAPPC3O43617 180 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 SLCO1A2P46721 670 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 DHX9Q08211 1270 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 RASSF3Q86WH2 238 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 PGBD4Q96DM1 585 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 FAM167AQ96KS9 214 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 RMDN3Q96TC7 470 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 ZMYND12Q9H0C1 365 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 TJP2Q9UDY2 1190 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 PIN4Q9Y237 131 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 CFAP65Q6ZU64 1925 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 PHLPP2Q6ZVD8 1323 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 MAPK13O15264 365 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 CYP2E1P05181 493 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 APOA4P06727 396 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 PLA2G4BP0C869 781 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 KHDRBS2Q5VWX1 349 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 ACAD11Q709F0 780 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 MAN1B1Q9UKM7 699 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 CARMIL3Q8ND23 1372 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 PHKA1P46020 1223 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 CARSP49589 748 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 MXI1P50539 228 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 C11orf74Q86VG3 221 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 DDX42Q86XP3 938 aaKnown RBP eCLIP11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 ENOX1Q8TC92 643 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 ZNF302Q9NR11 478 aa11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 DIS3Q9Y2L1 958 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 SRPRBQ9Y5M8 271 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-215ENST00000399637 ALDH1A2O94788 518 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 GSPT1P15170 499 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 OR1G1P47890 313 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 TMC2Q8TDI7 906 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 RABGGTAQ92696 567 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 EMILIN3Q9NT22 766 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 FEM1BQ9UK73 627 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 PCDHB8Q9UN66 801 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 ALDH1A3P47895 512 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 CENPAP49450 140 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 C9orf131Q5VYM1 1079 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 ST13P4Q8IZP2 240 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 MRPL40Q9NQ50 206 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 RNF14Q9UBS8 474 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 SLC25A13Q9UJS0 675 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 GOLGA8IPA6NC78 632 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 GOLGA8JA6NMD2 632 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 ETF1P62495 437 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 MECOMQ03112 1051 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 SFSWAPQ12872 951 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 UBE2SQ16763 222 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 FOXR1Q6PIV2 292 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 GTSE1Q9NYZ3 720 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 PBRM1Q86U86 1689 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 KPNA7A9QM74 516 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 JAK3P52333 1124 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 RPAINQ86UA6 219 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 NAF1Q96HR8 494 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 CAPN10Q9HC96 672 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 KLHL8Q9P2G9 620 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 MTMR6Q9Y217 621 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 IPPQ9Y573 584 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 hCG_2014768A0A024R1R8 64 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 SPAG7O75391 227 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 CETPP11597 493 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 SKIP12755 728 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 NME3Q13232 169 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 C6orf118Q5T5N4 469 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 SLC26A7Q8TE54 656 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 TRPV6Q9H1D0 765 aa11.75□□□□□ -0.53
CACNA1C-215ENST00000399637 A0A1W2PQ27 194 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 A0A1W2PQ64 194 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 A0A1W2PQD8 194 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 LMNAP02545 664 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 ADCY2Q08462 1091 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 TBL3Q12788 808 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 MAGEB5Q9BZ81 275 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 ASNSD1Q9NWL6 643 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 AKAP7Q9P0M2 348 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 ARHGAP10A1A4S6 786 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 CTNND1O60716 968 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 ADORA1P30542 326 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 MTMR1Q13613 665 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 DEFB128Q7Z7B8 93 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 PATL1Q86TB9 770 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 TAGAPQ8N103 731 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 TTC8Q8TAM2 541 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 RNF146Q9NTX7 359 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 USP17L15C9J2P7 530 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 USP17L13C9JLJ4 530 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 USP17L11C9JVI0 530 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 USP17L18D6R9N7 530 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 USP17L22D6RA61 530 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 USP17L17D6RBQ6 530 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 USP17L19D6RCP7 530 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 USP17L20D6RJB6 530 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 OCA2Q04671 838 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 USP17L24Q0WX57 530 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 SIX5Q8N196 739 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms