RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 PTENP60484 403 aa19.35■□□□□ 0.69
SMIM11A-202ENST00000399295 CAPSQ13938 189 aa19.35■□□□□ 0.69
SMIM11A-202ENST00000399295 CSRNP2Q9H175 543 aa19.35■□□□□ 0.69
SMIM11A-202ENST00000399295 MINDY3Q9H8M7 445 aa19.35■□□□□ 0.69
SMIM11A-202ENST00000399295 LRFN2Q9ULH4 789 aa19.35■□□□□ 0.69
SMIM11A-202ENST00000399295 PCDHB7Q9Y5E2 793 aa19.35■□□□□ 0.69
SMIM11A-202ENST00000399295 CHD9Q3L8U1 2897 aa19.34■□□□□ 0.69
SMIM11A-202ENST00000399295 LINC01553A4QN01 128 aa19.34■□□□□ 0.69
SMIM11A-202ENST00000399295 DGKIO75912 1065 aa19.34■□□□□ 0.69
SMIM11A-202ENST00000399295 SSBP05455 408 aaKnown RBP eCLIP19.34■□□□□ 0.69
SMIM11A-202ENST00000399295 FAM189BP81408 668 aa19.34■□□□□ 0.69
SMIM11A-202ENST00000399295 TMEM119Q4V9L6 283 aa19.34■□□□□ 0.69
SMIM11A-202ENST00000399295 KRI1Q8N9T8 703 aaKnown RBP19.34■□□□□ 0.69
SMIM11A-202ENST00000399295 RASSF8Q8NHQ8 419 aa19.34■□□□□ 0.69
SMIM11A-202ENST00000399295 SP7Q8TDD2 431 aaPredicted RBP19.34■□□□□ 0.69
SMIM11A-202ENST00000399295 CLIC6Q96NY7 704 aa19.34■□□□□ 0.69
SMIM11A-202ENST00000399295 CERS4Q9HA82 394 aa19.34■□□□□ 0.69
SMIM11A-202ENST00000399295 DACT1Q9NYF0 836 aa19.34■□□□□ 0.69
SMIM11A-202ENST00000399295 PIN4Q9Y237 131 aaKnown RBP19.34■□□□□ 0.69
SMIM11A-202ENST00000399295 TTC3P53804 2025 aa19.34■□□□□ 0.69
SMIM11A-202ENST00000399295 INO80B-WBP1J3KQ70 363 aa19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 KARSQ15046 597 aaKnown RBP19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 SPECC1Q5M775 1068 aa19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 RINT1Q6NUQ1 792 aa19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 CAVIN1Q6NZI2 390 aaKnown RBP19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 CCDC73Q6ZRK6 1079 aa19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 IFNLR1Q8IU57 520 aaPredicted RBP19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 SYT2Q8N9I0 419 aaPredicted RBP19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 MRPS27Q92552 414 aaKnown RBP19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 KIFAP3Q92845 792 aa19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 EPSTI1Q96J88 318 aa19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 GAS2L1Q99501 681 aaPredicted RBP19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 NFKBIZQ9BYH8 718 aa19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 CCSER1Q9C0I3 900 aa19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 PRDM12Q9H4Q4 367 aa19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 POLD4Q9HCU8 107 aa19.33■□□□□ 0.68
SMIM11A-202ENST00000399295 CDH23Q9H251 3354 aa19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 LRRIQ4A6NIV6 560 aa19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 LETM1O95202 739 aaPredicted RBP19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 PLA2G4BP0C869 781 aa19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 CMA1P23946 247 aa19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 PCBP1Q15365 356 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 TWF2Q6IBS0 349 aaKnown RBP19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 USP49Q70CQ1 688 aa19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 FIBCD1Q8N539 461 aa19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 MYLIPQ8WY64 445 aa19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 ARNTL2Q8WYA1 636 aa19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 ZNF689Q96CS4 500 aaPredicted RBP19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 TGS1Q96RS0 853 aaKnown RBP19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 RUSC1Q9BVN2 902 aa19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 ELAC1Q9H777 363 aaKnown RBP19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 AGPAT5Q9NUQ2 364 aa19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 TMEM161AQ9NX61 479 aa19.32■□□□□ 0.68
SMIM11A-202ENST00000399295 ADGRA3Q8IWK6 1321 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 A0A0U1RQF3 1178 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 ERLIN2O94905 339 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 PLCG1P19174 1290 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 TXLNAP40222 546 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 SLC12A3P55017 1021 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 MBTD1Q05BQ5 628 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 NCBP1Q09161 790 aaKnown RBP19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 BTG3Q14201 252 aaPredicted RBP19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 PPP2R5AQ15172 486 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 AXDND1Q5T1B0 1012 aaPredicted RBP19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 CCDC183Q5T5S1 534 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 C1orf186Q6ZWK4 172 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 SPRED2Q7Z698 418 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 ECHDC2Q86YB7 292 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 BSNDQ8WZ55 320 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 SYMPKQ92797 1274 aaKnown RBP19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 IFT74Q96LB3 600 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 SAMD11Q96NU1 681 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 TRAIPQ9BWF2 469 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 RC3H2Q9HBD1 1191 aaKnown RBP19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 CCDC39Q9UFE4 941 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 MTUS1Q9ULD2 1270 aa19.31■□□□□ 0.68
SMIM11A-202ENST00000399295 HIP1RO75146 1068 aa19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 POU3F3P20264 500 aaPredicted RBP19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 GUCY2CP25092 1073 aa19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 HOXA11P31270 313 aaPredicted RBP19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 NAMPTP43490 491 aa19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 GATMP50440 423 aa19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 ERVK-21P61565 698 aa19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 FAM160A1Q05DH4 1040 aa19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 ZBTB8OSQ8IWT0 167 aa19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 FSIP1Q8NA03 581 aa19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 RNF169Q8NCN4 708 aa19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 DRC1Q96MC2 740 aa19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 TIPINQ9BVW5 301 aa19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 C2orf40Q9H1Z8 148 aa19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 KCND2Q9NZV8 630 aa19.3■□□□□ 0.68
SMIM11A-202ENST00000399295 TSPAN1O60635 241 aa19.29■□□□□ 0.68
SMIM11A-202ENST00000399295 EOMESO95936 686 aa19.29■□□□□ 0.68
SMIM11A-202ENST00000399295 AXLP30530 894 aa19.29■□□□□ 0.68
SMIM11A-202ENST00000399295 PAN2Q504Q3 1202 aaKnown RBP19.29■□□□□ 0.68
SMIM11A-202ENST00000399295 CDCA2Q69YH5 1023 aaPredicted RBP19.29■□□□□ 0.68
SMIM11A-202ENST00000399295 CMTR2Q8IYT2 770 aaKnown RBP19.29■□□□□ 0.68
SMIM11A-202ENST00000399295 DAW1Q8N136 415 aa19.29■□□□□ 0.68
SMIM11A-202ENST00000399295 DEPTORQ8TB45 409 aa19.29■□□□□ 0.68
SMIM11A-202ENST00000399295 LRRC15Q8TF66 581 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms