RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 PRRC2BQ5JSZ5 2229 aaKnown RBP15.62■□□□□ 0.09
HLA-DQB1-202ENST00000399079 TBKBP1A7MCY6 615 aa15.62■□□□□ 0.09
HLA-DQB1-202ENST00000399079 MBTD1Q05BQ5 628 aa15.62■□□□□ 0.09
HLA-DQB1-202ENST00000399079 POU5F1BQ06416 359 aa15.62■□□□□ 0.09
HLA-DQB1-202ENST00000399079 ZNF598Q86UK7 904 aaKnown RBP15.62■□□□□ 0.09
HLA-DQB1-202ENST00000399079 LRRC15Q8TF66 581 aa15.62■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CLP1Q92989 425 aaKnown RBP15.62■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CDK5RAP3Q96JB5 506 aa15.62■□□□□ 0.09
HLA-DQB1-202ENST00000399079 AK8Q96MA6 479 aa15.62■□□□□ 0.09
HLA-DQB1-202ENST00000399079 RUSC1Q9BVN2 902 aa15.62■□□□□ 0.09
HLA-DQB1-202ENST00000399079 RNF19AQ9NV58 838 aa15.62■□□□□ 0.09
HLA-DQB1-202ENST00000399079 MEIS3P2A8K0S8 358 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 TSPAN1O60635 241 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 ERLIN2O94905 339 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CTNNB1P35222 781 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 LONP1P36776 959 aaKnown RBP15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 BMPR1AP36894 532 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 UBA7P41226 1012 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 FOXD4L6Q3SYB3 417 aaPredicted RBP15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CLLU1OSQ5K130 101 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 RINT1Q6NUQ1 792 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 FOXD4L3Q6VB84 417 aaPredicted RBP15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 USP49Q70CQ1 688 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 IFNLR1Q8IU57 520 aaPredicted RBP15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 LPPQ93052 612 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CPB2Q96IY4 423 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CLIC6Q96NY7 704 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 NT5C3AQ9H0P0 336 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CSRNP2Q9H175 543 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 FAM105AQ9NUU6 356 aa15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 TFIP11Q9UBB9 837 aaKnown RBP15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 FBXO2Q9UK22 296 aaPredicted RBP15.61■□□□□ 0.09
HLA-DQB1-202ENST00000399079 H3BNC9 293 aa15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 B4GALT5O43286 388 aa15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 GTPBP6O43824 516 aaPredicted RBP15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 SSBP05455 408 aaKnown RBP eCLIP15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 ZSCAN22P10073 491 aaPredicted RBP15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 POU3F3P20264 500 aaPredicted RBP15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 RAD51AP2Q09MP3 1159 aa15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 KARSQ15046 597 aaKnown RBP15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 AMHR2Q16671 573 aa15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 TMEM119Q4V9L6 283 aa15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 DAW1Q8N136 415 aa15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 EPSTI1Q96J88 318 aa15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 SAMD11Q96NU1 681 aa15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CASD1Q96PB1 797 aa15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 KIFC3Q9BVG8 833 aa15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 TRAIPQ9BWF2 469 aa15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 NFKBIZQ9BYH8 718 aa15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 TYW1Q9NV66 732 aaKnown RBP15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 RNF216Q9NWF9 866 aaPredicted RBP15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 COL4A4P53420 1690 aaPredicted RBP15.6■□□□□ 0.09
HLA-DQB1-202ENST00000399079 EOMESO95936 686 aa15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 GPM6BQ13491 265 aa15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 SLC39A14Q15043 492 aa15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 UBXN11Q5T124 520 aa15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 LRRC55Q6ZSA7 311 aa15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 C1orf186Q6ZWK4 172 aa15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CDR2LQ86X02 465 aaPredicted RBP15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 SYT2Q8N9I0 419 aaPredicted RBP15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 HELQQ8TDG4 1101 aa15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CALML4Q96GE6 196 aa15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 TMEM117Q9H0C3 514 aa15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 RNF39Q9H2S5 420 aa15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 PRDM6Q9NQX0 595 aa15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 USP20Q9Y2K6 914 aa15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 PCDHB2Q9Y5E7 798 aa15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 SRPRBQ9Y5M8 271 aaKnown RBP15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 FNDC1Q4ZHG4 1894 aaPredicted RBP15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 NLRC5Q86WI3 1866 aa15.59■□□□□ 0.09
HLA-DQB1-202ENST00000399079 TTLL13PA6NNM8 815 aa15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 SFI1A8K8P3 1242 aa15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 C5orf67F2Z3F1 127 aa15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 HIP1RO75146 1068 aa15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 F13A1P00488 732 aa15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 PLA2G4BP0C869 781 aa15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 ARF4P18085 180 aaPredicted RBP15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 PLCG1P19174 1290 aa15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 SLC12A3P55017 1021 aa15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 MAPK7Q13164 816 aa15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 DHX8Q14562 1220 aaKnown RBP15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 CDCA2Q69YH5 1023 aaPredicted RBP15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 ABI1Q8IZP0 508 aa15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 RASSF8Q8NHQ8 419 aa15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 KIFAP3Q92845 792 aa15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 EIF2AQ9BY44 585 aaKnown RBP15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 ALG13Q9NP73 1137 aaKnown RBP15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 DAXXQ9UER7 740 aaPredicted RBP15.58■□□□□ 0.09
HLA-DQB1-202ENST00000399079 NPHP3-ACAD11A0A0J9YXS1 232 aa15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 GRM6O15303 877 aa15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 HOXA2O43364 376 aa15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 ZNF623O75123 536 aa15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 CSPG5O95196 566 aa15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 LIG1P18858 919 aa15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 NAMPTP43490 491 aa15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 NASPP49321 788 aaPredicted RBP15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 RAB27AP51159 221 aa15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PCBP1Q15365 356 aaKnown RBP eCLIP15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 SPOUT1Q5T280 376 aaKnown RBP15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 NOTUMQ6P988 496 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms