RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 DHX8Q14562 1220 aaKnown RBP11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 FAM187BQ17R55 369 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 CNNM4Q6P4Q7 775 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 CRIPAKQ8N1N5 446 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 TMEM87AQ8NBN3 555 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 MRPS27Q92552 414 aaKnown RBP11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 DHX58Q96C10 678 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 DNAJC19Q96DA6 116 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 TRAIPQ9BWF2 469 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 CCDC113Q9H0I3 377 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 C2orf40Q9H1Z8 148 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 TSPYL2Q9H2G4 693 aaPredicted RBP11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 POLD4Q9HCU8 107 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 CHST12Q9NRB3 414 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 RGS18Q9NS28 235 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 AGPAT5Q9NUQ2 364 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 KCNG1Q9UIX4 513 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 SLC4A7Q9Y6M7 1214 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 RANBP2P49792 3224 aaKnown RBP11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 ADGRA3Q8IWK6 1321 aa11.55□□□□□ -0.56
CYCSP55-201ENST00000399027 NPHP3-ACAD11A0A0J9YXS1 232 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 FRMD3A2A2Y4 597 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 MYMKA6NI61 221 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 ZBBXA8MT70 800 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 MGEA5O60502 916 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 AMHP03971 560 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 FGFR4P22455 802 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 AXLP30530 894 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 NPTX2P47972 431 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 KCNJ6P48051 423 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 NDUFA8P51970 172 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 NCKAP1LP55160 1127 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 PEX3P56589 373 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 DEFB103AP81534 67 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 SMAD3P84022 425 aaKnown RBP11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 RAD51AP2Q09MP3 1159 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 DMP1Q13316 513 aaPredicted RBP11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 AMHR2Q16671 573 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 CSPP1Q1MSJ5 1256 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 ZBTB8OSQ8IWT0 167 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 DEPTORQ8TB45 409 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 SPIRE2Q8WWL2 714 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 DDX12PQ92771 950 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 TOP1MTQ969P6 601 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 PRIMPOLQ96LW4 560 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 LRRC27Q9C0I9 530 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 FZD8Q9H461 694 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 GOLPH3LQ9H4A5 285 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 C1orf112Q9NSG2 853 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 LARSQ9P2J5 1176 aaKnown RBP11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 ARHGAP28Q9P2N2 729 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 USP25Q9UHP3 1055 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 TDRD15B5MCY1 1934 aaKnown RBP11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 PHLPP2Q6ZVD8 1323 aa11.54□□□□□ -0.56
CYCSP55-201ENST00000399027 PDCD11Q14690 1871 aaKnown RBP11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 SFI1A8K8P3 1242 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 C9IYK1 514 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 INO80B-WBP1J3KQ70 363 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 ACTN4O43707 911 aaKnown RBP11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 TSPAN1O60635 241 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 SLFN14P0C7P3 912 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 ATP2A2P16615 1042 aaKnown RBP11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 ZSCAN20P17040 1043 aaPredicted RBP11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 SCP2P22307 547 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 HOXA11P31270 313 aaPredicted RBP11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 SYKP43405 635 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 EFNA5P52803 228 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 FAM189BP81408 668 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 AMPD3Q01432 767 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 CACNB1Q02641 598 aaPredicted RBP11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 HABP4Q5JVS0 413 aaKnown RBP11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 CATSPER4Q7RTX7 472 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 FSIP1Q8NA03 581 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 FIZ1Q96SL8 496 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 ADAM2Q99965 735 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 TRIM9Q9C026 710 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 TMEM134Q9H6X4 195 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 PARVGQ9HBI0 331 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 KMT5AQ9NQR1 393 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 PRMT7Q9NVM4 692 aaPredicted RBP11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 DACT1Q9NYF0 836 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 CNTNAP2Q9UHC6 1331 aa11.53□□□□□ -0.56
CYCSP55-201ENST00000399027 DENND3A2RUS2 1198 aa11.52□□□□□ -0.57
CYCSP55-201ENST00000399027 H0YCG3 227 aa11.52□□□□□ -0.57
CYCSP55-201ENST00000399027 ERLIN2O94905 339 aa11.52□□□□□ -0.57
CYCSP55-201ENST00000399027 FAM13AO94988 1023 aa11.52□□□□□ -0.57
CYCSP55-201ENST00000399027 GJB5O95377 273 aa11.52□□□□□ -0.57
CYCSP55-201ENST00000399027 KRT18P05783 430 aaKnown RBP11.52□□□□□ -0.57
CYCSP55-201ENST00000399027 MAPTP10636 758 aaKnown RBP11.52□□□□□ -0.57
CYCSP55-201ENST00000399027 ARF4P18085 180 aaPredicted RBP11.52□□□□□ -0.57
CYCSP55-201ENST00000399027 SARSP49591 514 aaKnown RBP11.52□□□□□ -0.57
CYCSP55-201ENST00000399027 SMTNP53814 917 aa11.52□□□□□ -0.57
CYCSP55-201ENST00000399027 MAPK6Q16659 721 aa11.52□□□□□ -0.57
CYCSP55-201ENST00000399027 LONRF3Q496Y0 759 aa11.52□□□□□ -0.57
CYCSP55-201ENST00000399027 FAM109BQ6ICB4 259 aaPredicted RBP11.52□□□□□ -0.57
CYCSP55-201ENST00000399027 SLC24A5Q71RS6 500 aa11.52□□□□□ -0.57
CYCSP55-201ENST00000399027 DYMQ7RTS9 669 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms