RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 GRIN3BO60391 1043 aa10.96□□□□□ -0.65
HMGCLL1-205ENST00000398661 UBOX5O94941 541 aa10.96□□□□□ -0.65
HMGCLL1-205ENST00000398661 MMEP08473 750 aa10.96□□□□□ -0.65
HMGCLL1-205ENST00000398661 CHN1P15882 459 aa10.96□□□□□ -0.65
HMGCLL1-205ENST00000398661 GIMAP8Q8ND71 665 aaPredicted RBP10.96□□□□□ -0.65
HMGCLL1-205ENST00000398661 CDCA5Q96FF9 252 aa10.96□□□□□ -0.65
HMGCLL1-205ENST00000398661 NAF1Q96HR8 494 aaKnown RBP10.96□□□□□ -0.65
HMGCLL1-205ENST00000398661 ANKRD27Q96NW4 1050 aa10.96□□□□□ -0.65
HMGCLL1-205ENST00000398661 ECT2Q9H8V3 914 aa10.96□□□□□ -0.65
HMGCLL1-205ENST00000398661 LRRC4CQ9HCJ2 640 aa10.96□□□□□ -0.65
HMGCLL1-205ENST00000398661 BARHL2Q9NY43 387 aa10.96□□□□□ -0.65
HMGCLL1-205ENST00000398661 PNMA2Q9UL42 364 aa10.96□□□□□ -0.65
HMGCLL1-205ENST00000398661 TMX2Q9Y320 296 aa10.96□□□□□ -0.65
HMGCLL1-205ENST00000398661 MYH7BA7E2Y1 1941 aa10.96□□□□□ -0.65
HMGCLL1-205ENST00000398661 TTC36A6NLP5 189 aa10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 LRRC53A6NM62 1247 aa10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 EIF4E1BA6NMX2 242 aaKnown RBP10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 UPP2O95045 317 aa10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 LAMB3Q13751 1172 aa10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 ASTE1Q2TB18 679 aaPredicted RBP10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 MTHFD1LQ6UB35 978 aa10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 RRAGAQ7L523 313 aa10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 APOBEC3FQ8IUX4 373 aaKnown RBP10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 GALNT15Q8N3T1 639 aa10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 ZFAND2BQ8WV99 257 aa10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 EZH1Q92800 747 aaPredicted RBP10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 MKL1Q969V6 931 aa10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 RIOX1Q9H6W3 641 aa10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 ARHGEF10LQ9HCE6 1279 aa10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 PACSIN2Q9UNF0 486 aaPredicted RBP10.96□□□□□ -0.66
HMGCLL1-205ENST00000398661 BICDL2A1A5D9 508 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 LRRD1A4D1F6 860 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 SPDYE3A6NKU9 549 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 F8VZ95 297 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 RHOBTB3O94955 611 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 KRT16P08779 473 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 VCAM1P19320 739 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 CCNE1P24864 410 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 MXRA7P84157 204 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 EHHADHQ08426 723 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 ASPRV1Q53RT3 343 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 ARMC3Q5W041 872 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 ANKRD40Q6AI12 368 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 ATXN2LQ8WWM7 1075 aaKnown RBP10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 TNFRSF25Q93038 417 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 P2RX5Q93086 422 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 PICK1Q9NRD5 415 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 FAM207AQ9NSI2 230 aaPredicted RBP10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 RGL1Q9NZL6 768 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 PCDHA6Q9UN73 950 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 SIK3Q9Y2K2 1263 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 PCDHA8Q9Y5H6 950 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 TBC1D12O60347 775 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 FLOT1O75955 427 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 STAT2P52630 851 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 ZNF131P52739 623 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 GRM1Q13255 1194 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 LETM2Q2VYF4 491 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 CCDC38Q502W7 563 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 TREML2Q5T2D2 321 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 TMC3Q7Z5M5 1100 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 APLFQ8IW19 511 aaPredicted RBP10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 BLIDQ8IZY5 108 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 KCNV2Q8TDN2 545 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 TEKT4Q8WW24 435 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 PLIN2Q99541 437 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 SELENOSQ9BQE4 189 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 SPZ1Q9BXG8 430 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 ADAM22Q9P0K1 906 aa10.95□□□□□ -0.66
HMGCLL1-205ENST00000398661 ZBTB5O15062 677 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 NKRFO15226 690 aaKnown RBP eCLIP10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 PYGLP06737 847 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 RCAN1P53805 252 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 LACTBP83111 547 aaPredicted RBP10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 ATP11AP98196 1134 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 MAP3K10Q02779 954 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 NAB2Q15742 525 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 CCDC178Q5BJE1 867 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 ANO7Q6IWH7 933 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 PROCA1Q8NCQ7 364 aaPredicted RBP10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 SCFD2Q8WU76 684 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 TAF4BQ92750 862 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 KLHL29Q96CT2 875 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 RPAP3Q9H6T3 665 aaPredicted RBP10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 MMRN2Q9H8L6 949 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 RAVER2Q9HCJ3 691 aaKnown RBP10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 STK38LQ9Y2H1 464 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 RPS6KL1Q9Y6S9 549 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 SSU72P8A0A1W2PR75 194 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 SPDYE5A6NIY4 337 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 PP2D1A8MPX8 630 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 NPTXRO95502 500 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 VIMP08670 466 aaKnown RBP10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 MSH2P43246 934 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 EIF3BP55884 814 aaKnown RBP10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 DHX9Q08211 1270 aaKnown RBP10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 GALNTL6Q49A17 601 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 SYDE2Q5VT97 1194 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 TRIM68Q6AZZ1 485 aa10.94□□□□□ -0.66
HMGCLL1-205ENST00000398661 SCYL3Q8IZE3 742 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms