RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 UGCGQ16739 394 aa19.89■□□□□ 0.78
CHRFAM7A-202ENST00000397827 SLFN11Q7Z7L1 901 aa19.89■□□□□ 0.78
CHRFAM7A-202ENST00000397827 NT5DC3Q86UY8 548 aa19.89■□□□□ 0.78
CHRFAM7A-202ENST00000397827 NEK9Q8TD19 979 aa19.89■□□□□ 0.78
CHRFAM7A-202ENST00000397827 SCFD2Q8WU76 684 aa19.89■□□□□ 0.78
CHRFAM7A-202ENST00000397827 RUFY1Q96T51 708 aa19.89■□□□□ 0.78
CHRFAM7A-202ENST00000397827 SH3GL2Q99962 352 aa19.89■□□□□ 0.78
CHRFAM7A-202ENST00000397827 MYOZ2Q9NPC6 264 aa19.89■□□□□ 0.78
CHRFAM7A-202ENST00000397827 A0A0A6YYK5 440 aaPredicted RBP19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 CES2O00748 559 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 KIF1CO43896 1103 aaKnown RBP19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 MYCLP12524 364 aaPredicted RBP19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 QARSP47897 775 aaKnown RBP19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 SLC9A9Q8IVB4 645 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 LMO3Q8TAP4 145 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 ACTRT1Q8TDG2 376 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 CEP89Q96ST8 783 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 SYT11Q9BT88 431 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 DDX47Q9H0S4 455 aaKnown RBP19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 STXBP5LQ9Y2K9 1186 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 UBIAD1Q9Y5Z9 338 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 BUB1BO60566 1050 aaPredicted RBP19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 LMNB1P20700 586 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 GCLMP48507 274 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 RPS6P62753 249 aaKnown RBP19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 MAP3K10Q02779 954 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 PPP3CAQ08209 521 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 SKIDA1Q1XH10 827 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 LMBR1Q8WVP7 490 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 ZBED3Q96IU2 234 aaPredicted RBP19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 INTUQ9ULD6 942 aa19.89■□□□□ 0.77
CHRFAM7A-202ENST00000397827 PGRMC1O00264 195 aaKnown RBP19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 ATP9AO75110 1047 aa19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 ITGA4P13612 1032 aa19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 KRT13P13646 458 aa19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 YWHABP31946 246 aaKnown RBP19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 TTMPQ5BVD1 217 aa19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 PCNX4Q63HM2 1172 aa19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 MCF2L2Q86YR7 1114 aa19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 ARHGEF26Q96DR7 871 aa19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 UBE2TQ9NPD8 197 aaPredicted RBP19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 WDR46O15213 610 aaKnown RBP19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 ERVK-9P63128 1117 aa19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 ALS2CLQ60I27 953 aa19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 THAP2Q9H0W7 228 aa19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 PPP1R9AQ9ULJ8 1098 aa19.88■□□□□ 0.77
CHRFAM7A-202ENST00000397827 SART1O43290 800 aaKnown RBP19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 RPS6KA5O75582 802 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 PLS3P13797 630 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 TNFAIP3P21580 790 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 VAMP7P51809 220 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 DDX42Q86XP3 938 aaKnown RBP eCLIP19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 ARHGEF19Q8IW93 802 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 MICALL1Q8N3F8 863 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 SLC20A1Q8WUM9 679 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 CTNNBL1Q8WYA6 563 aaPredicted RBP19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 SLC38A10Q9HBR0 1119 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 SUCLA2Q9P2R7 463 aaPredicted RBP19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 KRIT1O00522 736 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 BACH1O14867 736 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 SLC16A4O15374 487 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 OPA1O60313 960 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 NPEPPSP55786 919 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 PEX3P56589 373 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 NNTQ13423 1086 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 HLTFQ14527 1009 aaKnown RBP eCLIP19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 PLA2G4FQ68DD2 849 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 KCTD16Q68DU8 428 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 HAUS6Q7Z4H7 955 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 SYCE1Q8N0S2 351 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 TMEM206Q9H813 350 aa19.87■□□□□ 0.77
CHRFAM7A-202ENST00000397827 ASTN2O75129 1339 aaPredicted RBP19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 GOLGA8IPA6NC78 632 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 GOLGA8JA6NMD2 632 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 GOLGA8KD6RF30 607 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 CFAP58Q5T655 872 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 INTS8Q75QN2 995 aaKnown RBP19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 PLEKHO2Q8TD55 490 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 RFFLQ8WZ73 363 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 HES6Q96HZ4 224 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 ACCSQ96QU6 501 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 HSPBP1Q9NZL4 362 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 TMEM253P0C7T8 217 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 PPFIA1Q13136 1202 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 PGM5Q15124 567 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 TTC19Q6DKK2 380 aaPredicted RBP19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 EFCAB13Q8IY85 973 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 IQCKQ8N0W5 287 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 TEPSINQ96N21 525 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 AMACRQ9UHK6 382 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 DBR1Q9UK59 544 aaKnown RBP19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 AMFRQ9UKV5 643 aa19.86■□□□□ 0.77
CHRFAM7A-202ENST00000397827 LOXHD1Q8IVV2 1947 aa19.85■□□□□ 0.77
CHRFAM7A-202ENST00000397827 TESPA1A2RU30 521 aaPredicted RBP19.85■□□□□ 0.77
CHRFAM7A-202ENST00000397827 CPP00450 1065 aa19.85■□□□□ 0.77
CHRFAM7A-202ENST00000397827 MTMR2Q13614 643 aa19.85■□□□□ 0.77
CHRFAM7A-202ENST00000397827 C1orf220Q5T0J3 134 aa19.85■□□□□ 0.77
CHRFAM7A-202ENST00000397827 NSMFQ6X4W1 530 aa19.85■□□□□ 0.77
CHRFAM7A-202ENST00000397827 NIPA1Q7RTP0 329 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms