RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 RASGRP4Q8TDF6 673 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 DAGLAQ9Y4D2 1042 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 BCORQ6W2J9 1755 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 COL2A1P02458 1487 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-205ENST00000397611 CFAP73A6NFT4 308 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 NR1H3Q13133 447 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 OTUD6AQ7L8S5 288 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 SP8Q8IXZ3 490 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 CEP70Q8NHQ1 597 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 SYT11Q9BT88 431 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 KCNQ5Q9NR82 932 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 TXLNGQ9NUQ3 528 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 TOGARAM1Q9Y4F4 1720 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 TRAPPC3O43617 180 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 FDX1P10109 184 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 TECP42680 631 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 SYDE1Q6ZW31 735 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-205ENST00000397611 MLXIPQ9HAP2 919 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 TMBIM4Q9HC24 238 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 I3L4J1 428 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 GLI1P08151 1106 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 ARHGAP4P98171 946 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 NFRKBQ6P4R8 1299 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 TMEM179Q6ZVK1 233 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 C12orf50Q8NA57 414 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-205ENST00000397611 BBOF1Q8ND07 529 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 PSMD1Q99460 953 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 GINM1Q9NU53 330 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 PCDHA1Q9Y5I3 950 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 TNRC6CQ9HCJ0 1690 aaKnown RBP5.86□□□□□ -1.47
PTPRD-205ENST00000397611 KIAA0391O15091 583 aaKnown RBP5.86□□□□□ -1.47
PTPRD-205ENST00000397611 RARGP13631 454 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 CARSP49589 748 aaKnown RBP5.86□□□□□ -1.47
PTPRD-205ENST00000397611 ADCY2Q08462 1091 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 FKBP1CQ5VVH2 108 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 TRMT10CQ7L0Y3 403 aaKnown RBP5.86□□□□□ -1.47
PTPRD-205ENST00000397611 NIPA1Q7RTP0 329 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 MIER3Q7Z3K6 550 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 RPGRQ92834 1020 aaKnown RBP5.86□□□□□ -1.47
PTPRD-205ENST00000397611 HOOK2Q96ED9 719 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 ERP44Q9BS26 406 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 BATF3Q9NR55 127 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 COQ4Q9Y3A0 265 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 ZNF233A6NK53 670 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 SERPINB6P35237 376 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 XRRA1Q6P2D8 792 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 CYFIP1Q7L576 1253 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 ENOSF1Q7L5Y1 443 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 SDCCAG8Q86SQ7 713 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-205ENST00000397611 LARGE2Q8N3Y3 721 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 AZI2Q9H6S1 392 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 DDX25Q9UHL0 483 aaKnown RBP5.85□□□□□ -1.47
PTPRD-205ENST00000397611 PTPN22Q9Y2R2 807 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 ATRNL1Q5VV63 1379 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 H0YGN5 161 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 NMT2O60551 498 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 SKIV2L2P42285 1042 aaKnown RBP5.85□□□□□ -1.47
PTPRD-205ENST00000397611 VPS41P49754 854 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 AOC3Q16853 763 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 PDCD7Q8N8D1 485 aaKnown RBP5.85□□□□□ -1.47
PTPRD-205ENST00000397611 LRRC8CQ8TDW0 803 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 SREK1Q8WXA9 508 aaKnown RBP5.85□□□□□ -1.47
PTPRD-205ENST00000397611 ARL8AQ96BM9 186 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 RILPQ96NA2 401 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 UIMC1Q96RL1 719 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 PANK4Q9NVE7 773 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 SENP1Q9P0U3 644 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 NFS1Q9Y697 457 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 SLC4A7Q9Y6M7 1214 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 MYH3P11055 1940 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 SCN7AQ01118 1682 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 SMAPO00193 183 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 MMP13P45452 471 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 MAGOHP61326 146 aaKnown RBP5.85□□□□□ -1.47
PTPRD-205ENST00000397611 PPATQ06203 517 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 MAP7D1Q3KQU3 841 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 GPBP1Q86WP2 473 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 MAGOHBQ96A72 148 aaKnown RBP5.85□□□□□ -1.47
PTPRD-205ENST00000397611 USP17L3A6NCW0 530 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 USP17L4A6NCW7 530 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 THAP12O43422 761 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 ZC3H11AO75152 810 aaKnown RBP eCLIP5.85□□□□□ -1.47
PTPRD-205ENST00000397611 TDP2O95551 362 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 RAD23BP54727 409 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 PPP2R2AP63151 447 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 RCN2Q14257 317 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 EPHA7Q15375 998 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 USP17L1Q7RTZ2 530 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 TXNRD3Q86VQ6 643 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 COL23A1Q86Y22 540 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-205ENST00000397611 MAPKAPK5Q8IW41 473 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 GMCL1P1Q8NEA9 526 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 TRIM11Q96F44 468 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 NACC1Q96RE7 527 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 PCYOX1Q9UHG3 505 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 RGPD5Q99666 1765 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 RASSF9O75901 435 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 NR3C1P04150 777 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 ADCY8P40145 1251 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 RELL1Q8IUW5 271 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms