RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 PDXKO00764 312 aa23.27■■□□□ 1.32
CPNE1-204ENST00000397443 CALUO43852 315 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-204ENST00000397443 ZNF18P17022 549 aa23.27■■□□□ 1.32
CPNE1-204ENST00000397443 BICD1Q96G01 975 aa23.27■■□□□ 1.32
CPNE1-204ENST00000397443 TRIM5Q9C035 493 aa23.27■■□□□ 1.32
CPNE1-204ENST00000397443 PAK6Q9NQU5 681 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-204ENST00000397443 MBLAC1A4D2B0 266 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-204ENST00000397443 RBAK-RBAKDNI3L0D1 243 aa23.26■■□□□ 1.31
CPNE1-204ENST00000397443 K7ERI5 159 aa23.26■■□□□ 1.31
CPNE1-204ENST00000397443 CSDE1O75534 798 aaKnown RBP23.26■■□□□ 1.31
CPNE1-204ENST00000397443 GNAT1P11488 350 aa23.26■■□□□ 1.31
CPNE1-204ENST00000397443 NR2F2P24468 414 aa23.26■■□□□ 1.31
CPNE1-204ENST00000397443 ADAM17P78536 824 aa23.26■■□□□ 1.31
CPNE1-204ENST00000397443 TFDP1Q14186 410 aa23.26■■□□□ 1.31
CPNE1-204ENST00000397443 CDKAL1Q5VV42 579 aa23.26■■□□□ 1.31
CPNE1-204ENST00000397443 GDF6Q6KF10 455 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-204ENST00000397443 FBXO46Q6PJ61 603 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-204ENST00000397443 HS2ST1Q7LGA3 356 aa23.26■■□□□ 1.31
CPNE1-204ENST00000397443 ARRDC4Q8NCT1 418 aa23.26■■□□□ 1.31
CPNE1-204ENST00000397443 DNAJB3Q8WWF6 145 aa23.26■■□□□ 1.31
CPNE1-204ENST00000397443 NLRP7Q8WX94 980 aa23.26■■□□□ 1.31
CPNE1-204ENST00000397443 TMEM206Q9H813 350 aa23.26■■□□□ 1.31
CPNE1-204ENST00000397443 GTF2IRD1Q9UHL9 959 aa23.26■■□□□ 1.31
CPNE1-204ENST00000397443 GRIN2DO15399 1336 aa23.26■■□□□ 1.31
CPNE1-204ENST00000397443 A0A087WZ62 844 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 SERPINC1P01008 464 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 STRN3Q13033 797 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 ADAM9Q13443 819 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 IRF2BP1Q8IU81 584 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 NOC3LQ8WTT2 800 aaKnown RBP23.25■■□□□ 1.31
CPNE1-204ENST00000397443 GLT1D1Q96MS3 346 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 FDXACB1Q9BRP7 624 aaPredicted RBP23.25■■□□□ 1.31
CPNE1-204ENST00000397443 KCNG1Q9UIX4 513 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 TRAF3IP3Q9Y228 551 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 KCNJ18B7U540 433 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 KBTBD13C9JR72 458 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 H0YCG3 227 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 NR3C1P04150 777 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 CYP2J2P51589 502 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 NLRP11P59045 1033 aaKnown RBP23.25■■□□□ 1.31
CPNE1-204ENST00000397443 FANCCQ00597 558 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 FKBP3Q00688 224 aaKnown RBP23.25■■□□□ 1.31
CPNE1-204ENST00000397443 ITGA7Q13683 1181 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 KCNJ12Q14500 433 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 KIZQ2M2Z5 673 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 LRRC55Q6ZSA7 311 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 MAP4K3Q8IVH8 894 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 ZBTB8OSQ8IWT0 167 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 ANP32BQ92688 251 aaKnown RBP23.25■■□□□ 1.31
CPNE1-204ENST00000397443 AGPAT3Q9NRZ7 376 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 EXOC7Q9UPT5 735 aa23.25■■□□□ 1.31
CPNE1-204ENST00000397443 MOXD2PA6NHM9 499 aa23.24■■□□□ 1.31
CPNE1-204ENST00000397443 INO80B-WBP1J3KQ70 363 aa23.24■■□□□ 1.31
CPNE1-204ENST00000397443 HNRNPDLO14979 420 aaKnown RBP23.24■■□□□ 1.31
CPNE1-204ENST00000397443 ASAP2O43150 1006 aa23.24■■□□□ 1.31
CPNE1-204ENST00000397443 ADCY5O95622 1261 aa23.24■■□□□ 1.31
CPNE1-204ENST00000397443 PPP4R3CPQ6ZMV5 832 aa23.24■■□□□ 1.31
CPNE1-204ENST00000397443 INO80BQ9C086 356 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-204ENST00000397443 PCIF1Q9H4Z3 704 aa23.24■■□□□ 1.31
CPNE1-204ENST00000397443 THAP9Q9H5L6 903 aa23.24■■□□□ 1.31
CPNE1-204ENST00000397443 MAGEC2Q9UBF1 373 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-204ENST00000397443 SMIM35A0A1B0GVV1 85 aa23.23■■□□□ 1.31
CPNE1-204ENST00000397443 A0A1W2PQ45 241 aaPredicted RBP23.23■■□□□ 1.31
CPNE1-204ENST00000397443 A0A1W2PQY0 241 aa23.23■■□□□ 1.31
CPNE1-204ENST00000397443 ANKRD63C9JTQ0 380 aa23.23■■□□□ 1.31
CPNE1-204ENST00000397443 EDRF1Q3B7T1 1238 aa23.23■■□□□ 1.31
CPNE1-204ENST00000397443 HVCN1Q96D96 273 aa23.23■■□□□ 1.31
CPNE1-204ENST00000397443 CNOT6LQ96LI5 555 aaKnown RBP23.23■■□□□ 1.31
CPNE1-204ENST00000397443 IFNKQ9P0W0 207 aa23.23■■□□□ 1.31
CPNE1-204ENST00000397443 CABYRO75952 493 aa23.23■■□□□ 1.31
CPNE1-204ENST00000397443 EDN1P05305 212 aa23.23■■□□□ 1.31
CPNE1-204ENST00000397443 TCP11X2Q5H9J9 407 aa23.23■■□□□ 1.31
CPNE1-204ENST00000397443 CEP135Q66GS9 1140 aa23.23■■□□□ 1.31
CPNE1-204ENST00000397443 TSEN34Q9BSV6 310 aaKnown RBP23.23■■□□□ 1.31
CPNE1-204ENST00000397443 MINDY3Q9H8M7 445 aa23.23■■□□□ 1.31
CPNE1-204ENST00000397443 IFT122Q9HBG6 1241 aa23.23■■□□□ 1.31
CPNE1-204ENST00000397443 CETN3O15182 167 aa23.22■■□□□ 1.31
CPNE1-204ENST00000397443 HOXC8P31273 242 aa23.22■■□□□ 1.31
CPNE1-204ENST00000397443 PHKA2P46019 1235 aa23.22■■□□□ 1.31
CPNE1-204ENST00000397443 GPC3P51654 580 aa23.22■■□□□ 1.31
CPNE1-204ENST00000397443 CDCA2Q69YH5 1023 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-204ENST00000397443 ZNF333Q96JL9 665 aa23.22■■□□□ 1.31
CPNE1-204ENST00000397443 CBWD1Q9BRT8 395 aa23.22■■□□□ 1.31
CPNE1-204ENST00000397443 STARD7Q9NQZ5 370 aa23.22■■□□□ 1.31
CPNE1-204ENST00000397443 PHLPP2Q6ZVD8 1323 aa23.22■■□□□ 1.31
CPNE1-204ENST00000397443 TULP1O00294 542 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-204ENST00000397443 FGFR1OPO95684 399 aaKnown RBP23.21■■□□□ 1.31
CPNE1-204ENST00000397443 CASP4P49662 377 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 LIG4P49917 911 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 EFNA5P52803 228 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 PTENP60484 403 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 KRT31Q15323 416 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 TARS2Q9BW92 718 aaKnown RBP23.21■■□□□ 1.31
CPNE1-204ENST00000397443 C2orf40Q9H1Z8 148 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 TAB2Q9NYJ8 693 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 TTLL13PA6NNM8 815 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 PES1O00541 588 aaKnown RBP23.21■■□□□ 1.31
CPNE1-204ENST00000397443 PRKCBP05771 671 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 PTGISQ16647 500 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 MAPK6Q16659 721 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms