RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 SEPT9Q9UHD8 586 aaPredicted RBP13.41□□□□□ -0.26
SYNE4-203ENST00000397428 USTQ9Y2C2 406 aa13.41□□□□□ -0.26
SYNE4-203ENST00000397428 MYO10Q9HD67 2058 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 MEIS3P2A8K0S8 358 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 PROB1E7EW31 1015 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 LILRB3O75022 631 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 TDP2O95551 362 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 SFPQP23246 707 aaKnown RBP eCLIP13.4□□□□□ -0.26
SYNE4-203ENST00000397428 SP100P23497 879 aaPredicted RBP13.4□□□□□ -0.26
SYNE4-203ENST00000397428 PSMC5P62195 406 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 SSRP1Q08945 709 aaKnown RBP13.4□□□□□ -0.26
SYNE4-203ENST00000397428 MTMR3Q13615 1198 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 TOB2Q14106 344 aaPredicted RBP13.4□□□□□ -0.26
SYNE4-203ENST00000397428 RARS2Q5T160 578 aaKnown RBP13.4□□□□□ -0.26
SYNE4-203ENST00000397428 GALNT17Q6IS24 598 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 KIAA1841Q6NSI8 718 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 GLB1LQ6UWU2 654 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 RUFY3Q7L099 469 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 ZBTB33Q86T24 672 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 RHPN2Q8IUC4 686 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 DAGLBQ8NCG7 672 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 BCL7CQ8WUZ0 217 aaPredicted RBP13.4□□□□□ -0.26
SYNE4-203ENST00000397428 AUTS2Q8WXX7 1259 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 ZNF274Q96GC6 653 aaPredicted RBP13.4□□□□□ -0.26
SYNE4-203ENST00000397428 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 DZANK1Q9NVP4 752 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 LIMD1Q9UGP4 676 aa13.4□□□□□ -0.26
SYNE4-203ENST00000397428 EML1O00423 815 aa13.39□□□□□ -0.27
SYNE4-203ENST00000397428 GALR2O43603 387 aaPredicted RBP13.39□□□□□ -0.27
SYNE4-203ENST00000397428 ZC3H11AO75152 810 aaKnown RBP eCLIP13.39□□□□□ -0.27
SYNE4-203ENST00000397428 ALDH2P05091 517 aa13.39□□□□□ -0.27
SYNE4-203ENST00000397428 WEE2P0C1S8 567 aa13.39□□□□□ -0.27
SYNE4-203ENST00000397428 EPCAMP16422 314 aa13.39□□□□□ -0.27
SYNE4-203ENST00000397428 TWF2Q6IBS0 349 aaKnown RBP13.39□□□□□ -0.27
SYNE4-203ENST00000397428 AGMOQ6ZNB7 445 aa13.39□□□□□ -0.27
SYNE4-203ENST00000397428 PPFIBP1Q86W92 1011 aa13.39□□□□□ -0.27
SYNE4-203ENST00000397428 ZNF280BQ86YH2 543 aa13.39□□□□□ -0.27
SYNE4-203ENST00000397428 TRIM22Q8IYM9 498 aa13.39□□□□□ -0.27
SYNE4-203ENST00000397428 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
SYNE4-203ENST00000397428 ATOH1Q92858 354 aaPredicted RBP13.39□□□□□ -0.27
SYNE4-203ENST00000397428 PGBD4Q96DM1 585 aa13.39□□□□□ -0.27
SYNE4-203ENST00000397428 FAM20AQ96MK3 541 aa13.39□□□□□ -0.27
SYNE4-203ENST00000397428 JPH2Q9BR39 696 aaPredicted RBP13.39□□□□□ -0.27
SYNE4-203ENST00000397428 CYP26B1Q9NR63 512 aa13.39□□□□□ -0.27
SYNE4-203ENST00000397428 DNAJB4Q9UDY4 337 aa13.39□□□□□ -0.27
SYNE4-203ENST00000397428 PCDHB2Q9Y5E7 798 aa13.39□□□□□ -0.27
SYNE4-203ENST00000397428 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.38□□□□□ -0.27
SYNE4-203ENST00000397428 H0Y858 1186 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 EPB41L2O43491 1005 aaKnown RBP13.38□□□□□ -0.27
SYNE4-203ENST00000397428 B4GALT3O60512 393 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 DDHD2O94830 711 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 DEXIO95424 95 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 HOXA11P31270 313 aaPredicted RBP13.38□□□□□ -0.27
SYNE4-203ENST00000397428 QARSP47897 775 aaKnown RBP13.38□□□□□ -0.27
SYNE4-203ENST00000397428 SLC11A1P49279 550 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 RAB27AP51159 221 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 CLCN5P51795 746 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 AFF1P51825 1210 aaKnown RBP13.38□□□□□ -0.27
SYNE4-203ENST00000397428 PPP2R5CQ13362 524 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 LONRF3Q496Y0 759 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 CATSPER4Q7RTX7 472 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 GPR149Q86SP6 731 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 EXOC8Q8IYI6 725 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 TMEM105Q8N8V8 129 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 PRPF31Q8WWY3 499 aaKnown RBP13.38□□□□□ -0.27
SYNE4-203ENST00000397428 SMOC2Q9H3U7 446 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 AGPAT5Q9NUQ2 364 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 FAM86C1Q9NVL1 165 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 KANSL3Q9P2N6 904 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 STK39Q9UEW8 545 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 PIN4Q9Y237 131 aaKnown RBP13.38□□□□□ -0.27
SYNE4-203ENST00000397428 PPME1Q9Y570 386 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 USP34Q70CQ2 3546 aa13.38□□□□□ -0.27
SYNE4-203ENST00000397428 GFRA3O60609 400 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 REC8O95072 547 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 EFEMP2O95967 443 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 ASGR2P07307 311 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 CNPP09543 421 aaKnown RBP13.37□□□□□ -0.27
SYNE4-203ENST00000397428 NPEPPSP55786 919 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 RNASELQ05823 741 aaKnown RBP13.37□□□□□ -0.27
SYNE4-203ENST00000397428 NONOQ15233 471 aaKnown RBP eCLIP13.37□□□□□ -0.27
SYNE4-203ENST00000397428 PTPN14Q15678 1187 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 UBXN11Q5T124 520 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 ASTLQ6HA08 431 aaPredicted RBP13.37□□□□□ -0.27
SYNE4-203ENST00000397428 SRGAP1Q7Z6B7 1085 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 TMEM87AQ8NBN3 555 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 FEZF2Q8TBJ5 459 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 AIFM3Q96NN9 605 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 KLHL5Q96PQ7 755 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 TMEM175Q9BSA9 504 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 DHX33Q9H6R0 707 aaKnown RBP13.37□□□□□ -0.27
SYNE4-203ENST00000397428 MINDY3Q9H8M7 445 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 DDX25Q9UHL0 483 aaKnown RBP13.37□□□□□ -0.27
SYNE4-203ENST00000397428 DBR1Q9UK59 544 aaKnown RBP13.37□□□□□ -0.27
SYNE4-203ENST00000397428 VAV3Q9UKW4 847 aa13.37□□□□□ -0.27
SYNE4-203ENST00000397428 ASAP2O43150 1006 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 SLC37A4O43826 429 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 DKC1O60832 514 aaKnown RBP eCLIP13.36□□□□□ -0.27
SYNE4-203ENST00000397428 P4HBP07237 508 aaKnown RBP13.36□□□□□ -0.27
SYNE4-203ENST00000397428 SRGAP2CP0DJJ0 459 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms