RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ZNF579Q8NAF0 562 aaKnown RBP15.5■□□□□ 0.07
SEC13-204ENST00000397099 RNF149Q8NC42 400 aa15.5■□□□□ 0.07
SEC13-204ENST00000397099 UBN1Q9NPG3 1134 aa15.5■□□□□ 0.07
SEC13-204ENST00000397099 STK39Q9UEW8 545 aa15.5■□□□□ 0.07
SEC13-204ENST00000397099 LRWD1Q9UFC0 647 aa15.5■□□□□ 0.07
SEC13-204ENST00000397099 LZTS1Q9Y250 596 aa15.5■□□□□ 0.07
SEC13-204ENST00000397099 BRWD1Q9NSI6 2320 aa15.5■□□□□ 0.07
SEC13-204ENST00000397099 BMP15O95972 392 aa15.49■□□□□ 0.07
SEC13-204ENST00000397099 PTENP60484 403 aa15.49■□□□□ 0.07
SEC13-204ENST00000397099 LEXMQ3ZCV2 418 aa15.49■□□□□ 0.07
SEC13-204ENST00000397099 FAM102BQ5T8I3 360 aa15.49■□□□□ 0.07
SEC13-204ENST00000397099 LARP1BQ659C4 914 aaKnown RBP15.49■□□□□ 0.07
SEC13-204ENST00000397099 GLB1LQ6UWU2 654 aa15.49■□□□□ 0.07
SEC13-204ENST00000397099 ZNF598Q86UK7 904 aaKnown RBP15.49■□□□□ 0.07
SEC13-204ENST00000397099 KSR1Q8IVT5 923 aa15.49■□□□□ 0.07
SEC13-204ENST00000397099 IGSF22Q8N9C0 903 aa15.49■□□□□ 0.07
SEC13-204ENST00000397099 PIGOQ8TEQ8 1089 aa15.49■□□□□ 0.07
SEC13-204ENST00000397099 ZNF668Q96K58 619 aaPredicted RBP15.49■□□□□ 0.07
SEC13-204ENST00000397099 FAM105AQ9NUU6 356 aa15.49■□□□□ 0.07
SEC13-204ENST00000397099 TYW1Q9NV66 732 aaKnown RBP15.49■□□□□ 0.07
SEC13-204ENST00000397099 PUF60Q9UHX1 559 aaKnown RBP15.49■□□□□ 0.07
SEC13-204ENST00000397099 FAM50BQ9Y247 325 aa15.49■□□□□ 0.07
SEC13-204ENST00000397099 CNTNAP2Q9UHC6 1331 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 ARHGEF35A5YM69 484 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 H3BQ06 376 aaPredicted RBP15.48■□□□□ 0.07
SEC13-204ENST00000397099 ZBTB39O15060 712 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 CD2BP2O95400 341 aaKnown RBP15.48■□□□□ 0.07
SEC13-204ENST00000397099 ARL2P36404 184 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 CCT6AP40227 531 aaKnown RBP15.48■□□□□ 0.07
SEC13-204ENST00000397099 GATMP50440 423 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 TOB1P50616 345 aaPredicted RBP15.48■□□□□ 0.07
SEC13-204ENST00000397099 KRT17Q04695 432 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 CUL4AQ13619 759 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 COL19A1Q14993 1142 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 KRT79Q5XKE5 535 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 ARL6IP4Q66PJ3 421 aaKnown RBP15.48■□□□□ 0.07
SEC13-204ENST00000397099 PTCRAQ6ISU1 281 aaPredicted RBP15.48■□□□□ 0.07
SEC13-204ENST00000397099 NOTUMQ6P988 496 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 BRAPQ7Z569 592 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 HACE1Q8IYU2 909 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 KLHL23Q8NBE8 558 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 SPPL3Q8TCT6 385 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 PABPC5Q96DU9 382 aaKnown RBP15.48■□□□□ 0.07
SEC13-204ENST00000397099 CASD1Q96PB1 797 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 C2orf40Q9H1Z8 148 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 ALG13Q9NP73 1137 aaKnown RBP15.48■□□□□ 0.07
SEC13-204ENST00000397099 XPNPEP1Q9NQW7 623 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.48■□□□□ 0.07
SEC13-204ENST00000397099 CLDND1Q9NY35 253 aa15.48■□□□□ 0.07
SEC13-204ENST00000397099 SLC26A4O43511 780 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 MED24O75448 989 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 CSDE1O75534 798 aaKnown RBP15.47■□□□□ 0.07
SEC13-204ENST00000397099 ITGB1P05556 798 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 FGFR1P11362 822 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 FGFR4P22455 802 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 PLCB3Q01970 1234 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 BMS1Q14692 1282 aaKnown RBP15.47■□□□□ 0.07
SEC13-204ENST00000397099 PPP2R5AQ15172 486 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 THNSL1Q8IYQ7 743 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 COLGALT1Q8NBJ5 622 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 RNF169Q8NCN4 708 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.47■□□□□ 0.07
SEC13-204ENST00000397099 INTS4Q96HW7 963 aaKnown RBP15.47■□□□□ 0.07
SEC13-204ENST00000397099 PRIMPOLQ96LW4 560 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 ZNF558Q96NG5 402 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 CWH43Q9H720 699 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 KANSL3Q9P2N6 904 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 PCDHB6Q9Y5E3 794 aa15.47■□□□□ 0.07
SEC13-204ENST00000397099 PHLPP2Q6ZVD8 1323 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 INO80B-WBP1J3KQ70 363 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 USO1O60763 962 aaKnown RBP15.46■□□□□ 0.07
SEC13-204ENST00000397099 FGF18O76093 207 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 CYP11B2P19099 503 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 SSTR3P32745 418 aaPredicted RBP15.46■□□□□ 0.07
SEC13-204ENST00000397099 ALDH7A1P49419 539 aaKnown RBP15.46■□□□□ 0.07
SEC13-204ENST00000397099 ATP2C1P98194 919 aaPredicted RBP15.46■□□□□ 0.07
SEC13-204ENST00000397099 POTEGQ6S5H5 508 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 MRPL10Q7Z7H8 261 aaKnown RBP15.46■□□□□ 0.07
SEC13-204ENST00000397099 ZBTB8OSQ8IWT0 167 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 URGCPQ8TCY9 931 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 POF1BQ8WVV4 589 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 KIFAP3Q92845 792 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 CDCA3Q99618 268 aaPredicted RBP15.46■□□□□ 0.07
SEC13-204ENST00000397099 C1QTNF1Q9BXJ1 281 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 NT5C3AQ9H0P0 336 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 POLR3FQ9H1D9 316 aaPredicted RBP15.46■□□□□ 0.07
SEC13-204ENST00000397099 IGFLR1Q9H665 355 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 TLR9Q9NR96 1032 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 PRMT7Q9NVM4 692 aaPredicted RBP15.46■□□□□ 0.07
SEC13-204ENST00000397099 KCNG1Q9UIX4 513 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 DNM3Q9UQ16 869 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 PCDHB2Q9Y5E7 798 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 ZMYM2Q9UBW7 1377 aa15.46■□□□□ 0.07
SEC13-204ENST00000397099 PLXNA4Q9HCM2 1894 aa15.46■□□□□ 0.06
SEC13-204ENST00000397099 PDIA4P13667 645 aaKnown RBP15.45■□□□□ 0.06
SEC13-204ENST00000397099 IL9P15248 144 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 ATF7P17544 494 aaPredicted RBP15.45■□□□□ 0.06
SEC13-204ENST00000397099 COL9A1P20849 921 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 GLRA2P23416 452 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 HOXA11P31270 313 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms