RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 GZF1Q9H116 711 aaPredicted RBP11.74□□□□□ -0.53
NUP98-205ENST00000397007 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
NUP98-205ENST00000397007 IL23AQ9NPF7 189 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 RGS18Q9NS28 235 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 FAM13BQ9NYF5 915 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 PTPRDP23468 1912 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 A0A1B0GUA9 196 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 ATN1P54259 1190 aaPredicted RBP11.74□□□□□ -0.53
NUP98-205ENST00000397007 COASYQ13057 564 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 BFSP2Q13515 415 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 TMEM240Q5SV17 173 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 C12orf56Q8IXR9 622 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 SLC7A3Q8WY07 619 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 DRC1Q96MC2 740 aa11.74□□□□□ -0.53
NUP98-205ENST00000397007 POLGP54098 1239 aaPredicted RBP11.73□□□□□ -0.53
NUP98-205ENST00000397007 NAB2Q15742 525 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 SV2BQ7L1I2 683 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 CCDC155Q8N6L0 562 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 APBB2Q92870 758 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 ARHGEF35A5YM69 484 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 USO1O60763 962 aaKnown RBP11.73□□□□□ -0.53
NUP98-205ENST00000397007 GAP43P17677 238 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 EIF4BP23588 611 aaKnown RBP11.73□□□□□ -0.53
NUP98-205ENST00000397007 CASP1P29466 404 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 DHX58Q96C10 678 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 PLIN2Q99541 437 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 BAIAP3O94812 1187 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 CYP2C18P33260 490 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 POU5F1Q01860 360 aaKnown RBP11.73□□□□□ -0.53
NUP98-205ENST00000397007 PSPC1Q8WXF1 523 aaKnown RBP11.73□□□□□ -0.53
NUP98-205ENST00000397007 FBXL18Q96ME1 805 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 CHST12Q9NRB3 414 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 DMAC2Q9NW81 257 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 SZT2Q5T011 3432 aa11.73□□□□□ -0.53
NUP98-205ENST00000397007 A0A087WZ62 844 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 C9IYK1 514 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 ZNF623O75123 536 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 ADSSP30520 456 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 HTRA4P83105 476 aaPredicted RBP11.72□□□□□ -0.53
NUP98-205ENST00000397007 SCFD1Q8WVM8 642 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 FDXACB1Q9BRP7 624 aaPredicted RBP11.72□□□□□ -0.53
NUP98-205ENST00000397007 ATP11BQ9Y2G3 1177 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 TGFB1I1O43294 461 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 PRPF40AO75400 957 aaKnown RBP11.72□□□□□ -0.53
NUP98-205ENST00000397007 PSMD2Q13200 908 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 POSTNQ15063 836 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 L1TD1Q5T7N2 865 aaKnown RBP11.72□□□□□ -0.53
NUP98-205ENST00000397007 CNKSR3Q6P9H4 555 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 ELAC1Q9H777 363 aaKnown RBP11.72□□□□□ -0.53
NUP98-205ENST00000397007 TXLNAP40222 546 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 BORCS6Q96GS4 357 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 GSDMAQ96QA5 445 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 ACO2Q99798 780 aaKnown RBP11.72□□□□□ -0.53
NUP98-205ENST00000397007 PDZD7Q9H5P4 517 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 PARVGQ9HBI0 331 aa11.72□□□□□ -0.53
NUP98-205ENST00000397007 ACKR2O00590 384 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 AXLP30530 894 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 KMT5BQ4FZB7 885 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 KANK3Q6NY19 840 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 SMG8Q8ND04 991 aaKnown RBP11.71□□□□□ -0.53
NUP98-205ENST00000397007 SLC17A8Q8NDX2 589 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 CXorf38Q8TB03 319 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 BADQ92934 168 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 CCDC51Q96ER9 411 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 DACT1Q9NYF0 836 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 A0A1W2PPC1 479 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 THPOP40225 353 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 NLRP11P59045 1033 aaKnown RBP11.71□□□□□ -0.53
NUP98-205ENST00000397007 ENPEPQ07075 957 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 MCL1Q07820 350 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 ZPBP2Q6X784 338 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 GSTCDQ8NEC7 633 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 GBP4Q96PP9 640 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 LRRC27Q9C0I9 530 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 TMEM63CQ9P1W3 806 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 PCDH10Q9P2E7 1040 aa11.71□□□□□ -0.53
NUP98-205ENST00000397007 PLXNA3P51805 1871 aa11.71□□□□□ -0.54
NUP98-205ENST00000397007 PPP1R3GB7ZBB8 358 aa11.71□□□□□ -0.54
NUP98-205ENST00000397007 IGBP1P78318 339 aa11.71□□□□□ -0.54
NUP98-205ENST00000397007 CLDN10P78369 228 aa11.71□□□□□ -0.54
NUP98-205ENST00000397007 STK4Q13043 487 aa11.71□□□□□ -0.54
NUP98-205ENST00000397007 KLHL40Q2TBA0 621 aa11.71□□□□□ -0.54
NUP98-205ENST00000397007 CRELD2Q6UXH1 353 aaPredicted RBP11.71□□□□□ -0.54
NUP98-205ENST00000397007 SFR1Q86XK3 245 aa11.71□□□□□ -0.54
NUP98-205ENST00000397007 C7orf61Q8IZ16 206 aa11.71□□□□□ -0.54
NUP98-205ENST00000397007 TMEM39AQ9NV64 488 aa11.71□□□□□ -0.54
NUP98-205ENST00000397007 PADI3Q9ULW8 664 aa11.71□□□□□ -0.54
NUP98-205ENST00000397007 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.54
NUP98-205ENST00000397007 MARCH6O60337 910 aa11.7□□□□□ -0.54
NUP98-205ENST00000397007 RPN1P04843 607 aaKnown RBP11.7□□□□□ -0.54
NUP98-205ENST00000397007 CSF2RAP15509 400 aa11.7□□□□□ -0.54
NUP98-205ENST00000397007 ABCD1P33897 745 aa11.7□□□□□ -0.54
NUP98-205ENST00000397007 KIZQ2M2Z5 673 aa11.7□□□□□ -0.54
NUP98-205ENST00000397007 SLC9A9Q8IVB4 645 aa11.7□□□□□ -0.54
NUP98-205ENST00000397007 SCLYQ96I15 445 aa11.7□□□□□ -0.54
NUP98-205ENST00000397007 C2orf40Q9H1Z8 148 aa11.7□□□□□ -0.54
NUP98-205ENST00000397007 TBX20Q9UMR3 447 aa11.7□□□□□ -0.54
NUP98-205ENST00000397007 TRAF3IP3Q9Y228 551 aa11.7□□□□□ -0.54
NUP98-205ENST00000397007 CD44P16070 742 aaKnown RBP11.7□□□□□ -0.54
NUP98-205ENST00000397007 ARF4P18085 180 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms