RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 KSR1Q8IVT5 923 aa12.34□□□□□ -0.43
NDUFA9-202ENST00000396655 PIGOQ8TEQ8 1089 aa12.34□□□□□ -0.43
NDUFA9-202ENST00000396655 PPM1EQ8WY54 764 aa12.34□□□□□ -0.43
NDUFA9-202ENST00000396655 TMEM143Q96AN5 459 aa12.34□□□□□ -0.43
NDUFA9-202ENST00000396655 NLRP4Q96MN2 994 aa12.34□□□□□ -0.43
NDUFA9-202ENST00000396655 XPNPEP1Q9NQW7 623 aa12.34□□□□□ -0.43
NDUFA9-202ENST00000396655 PCDHB6Q9Y5E3 794 aa12.34□□□□□ -0.43
NDUFA9-202ENST00000396655 MRPL42Q9Y6G3 142 aaKnown RBP12.34□□□□□ -0.43
NDUFA9-202ENST00000396655 ARID2Q68CP9 1835 aa12.34□□□□□ -0.43
NDUFA9-202ENST00000396655 SLC26A4O43511 780 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 MED24O75448 989 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 BMP15O95972 392 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 SRGAP2CP0DJJ0 459 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 ATP2C1P98194 919 aaPredicted RBP12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 UBE3AQ05086 875 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 COL19A1Q14993 1142 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 FAM102BQ5T8I3 360 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 ABI1Q8IZP0 508 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 RNF149Q8NC42 400 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 HLA-CQ95604 372 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 CCDC51Q96ER9 411 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 ZNF668Q96K58 619 aaPredicted RBP12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 ASB2Q96Q27 587 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 AGPAT5Q9NUQ2 364 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 PLAGL2Q9UPG8 496 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 PCDHB12Q9Y5F1 795 aa12.33□□□□□ -0.44
NDUFA9-202ENST00000396655 COL4A4P53420 1690 aaPredicted RBP12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 TBKBP1A7MCY6 615 aa12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 RBAK-RBAKDNI3L0D1 243 aa12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 CSDE1O75534 798 aaKnown RBP12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 PDIA4P13667 645 aaKnown RBP12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 CYP11B2P19099 503 aa12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 HOXA11P31270 313 aaPredicted RBP12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 CCT6AP40227 531 aaKnown RBP12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 KRT79Q5XKE5 535 aa12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 TWF2Q6IBS0 349 aaKnown RBP12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 MRPL10Q7Z7H8 261 aaKnown RBP12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 CNNM3Q8NE01 707 aa12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 SNX21Q969T3 373 aa12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 PGBD4Q96DM1 585 aa12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 AK8Q96MA6 479 aa12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 CASD1Q96PB1 797 aa12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 MRPL9Q9BYD2 267 aaKnown RBP12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 NSUN3Q9H649 340 aaKnown RBP12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 TYW1Q9NV66 732 aaKnown RBP12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 PIN4Q9Y237 131 aaKnown RBP12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 LZTS1Q9Y250 596 aa12.32□□□□□ -0.44
NDUFA9-202ENST00000396655 ARHGEF35A5YM69 484 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 C19orf67A6NJJ6 358 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 GRM6O15303 877 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 FGFR1P11362 822 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 ATF7P17544 494 aaPredicted RBP12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 LAG3P18627 525 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 FGFR4P22455 802 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 GLRA2P23416 452 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 PPM1AP35813 382 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 NBR1Q14596 966 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 HYIQ5T013 277 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 PDE12Q6L8Q7 609 aaKnown RBP12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 POTEGQ6S5H5 508 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 PADI6Q6TGC4 694 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 LRRC43Q8N309 656 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 MICALL1Q8N3F8 863 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 SPPL3Q8TCT6 385 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 PPP2R3CQ969Q6 453 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 PRIMPOLQ96LW4 560 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 CWH43Q9H720 699 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 MINDY3Q9H8M7 445 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 UBN1Q9NPG3 1134 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 FAM105AQ9NUU6 356 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 RNF19AQ9NV58 838 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 KCNG1Q9UIX4 513 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 DNM3Q9UQ16 869 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 GTF3C3Q9Y5Q9 886 aa12.31□□□□□ -0.44
NDUFA9-202ENST00000396655 MUC6Q6W4X9 2439 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 FSD2A1L4K1 749 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 K7ELQ4 463 aaPredicted RBP12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 ERLIN2O94905 339 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 ITGB1P05556 798 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 GATMP50440 423 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 PLCB3Q01970 1234 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 CAPSQ13938 189 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 PPP2R5AQ15172 486 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 SKIV2LQ15477 1246 aaKnown RBP12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 IL17AQ16552 155 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 FAM187BQ17R55 369 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 PAN2Q504Q3 1202 aaKnown RBP12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 CLLU1OSQ5K130 101 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 NOTUMQ6P988 496 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 GLB1LQ6UWU2 654 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 KLHL23Q8NBE8 558 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 SNX29Q8TEQ0 813 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 KIFAP3Q92845 792 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 TIPINQ9BVW5 301 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 NT5C3AQ9H0P0 336 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 C2orf40Q9H1Z8 148 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 KANSL3Q9P2N6 904 aa12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 PUF60Q9UHX1 559 aaKnown RBP12.3□□□□□ -0.44
NDUFA9-202ENST00000396655 KIAA1024Q9UPX6 916 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms