RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 SARS2Q9NP81 518 aaKnown RBP14.84□□□□□ -0.03
COL4A3-202ENST00000396578 ABCC10Q5T3U5 1492 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 EIF4E1BA6NMX2 242 aaKnown RBP14.84□□□□□ -0.03
COL4A3-202ENST00000396578 SEC24DO94855 1032 aaPredicted RBP14.84□□□□□ -0.03
COL4A3-202ENST00000396578 SERPINB4P48594 390 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 ROR1Q01973 937 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 DSTYKQ6XUX3 929 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 TTC30BQ8N4P2 665 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 GREM2Q9H772 168 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 ATG3Q9NT62 314 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 DNAJC12Q9UKB3 198 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 RECQLP46063 649 aaPredicted RBP14.84□□□□□ -0.03
COL4A3-202ENST00000396578 RESTQ13127 1097 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 ZNF667Q5HYK9 610 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 HEATR6Q6AI08 1181 aaKnown RBP14.84□□□□□ -0.03
COL4A3-202ENST00000396578 BTNL9Q6UXG8 535 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 OR6B3Q8NGW1 331 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 TARSL2A2RTX5 802 aaKnown RBP14.84□□□□□ -0.03
COL4A3-202ENST00000396578 IFNAR1P17181 557 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 PSMD7P51665 324 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 KLC1Q07866 573 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 GJC2Q5T442 439 aaPredicted RBP14.84□□□□□ -0.03
COL4A3-202ENST00000396578 DPY19L2Q6NUT2 758 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 UNC13DQ70J99 1090 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 COA7Q96BR5 231 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 PRMT1Q99873 361 aaKnown RBP14.84□□□□□ -0.03
COL4A3-202ENST00000396578 PNMA6FA0A0J9YX94 578 aa14.83□□□□□ -0.03
COL4A3-202ENST00000396578 GOLGA8IPA6NC78 632 aa14.83□□□□□ -0.03
COL4A3-202ENST00000396578 GOLGA8JA6NMD2 632 aa14.83□□□□□ -0.03
COL4A3-202ENST00000396578 HNRNPRO43390 633 aaKnown RBP14.83□□□□□ -0.03
COL4A3-202ENST00000396578 ZNF699Q32M78 642 aa14.83□□□□□ -0.03
COL4A3-202ENST00000396578 OSBPL3Q9H4L5 887 aa14.83□□□□□ -0.03
COL4A3-202ENST00000396578 GPR108Q9NPR9 543 aa14.83□□□□□ -0.03
COL4A3-202ENST00000396578 CCDC78A2IDD5 438 aa14.83□□□□□ -0.03
COL4A3-202ENST00000396578 SLC16A2P36021 539 aa14.83□□□□□ -0.03
COL4A3-202ENST00000396578 AARS2Q5JTZ9 985 aaKnown RBP14.83□□□□□ -0.03
COL4A3-202ENST00000396578 CUL3Q13618 768 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 ZNF564Q8TBZ8 553 aaPredicted RBP14.83□□□□□ -0.04
COL4A3-202ENST00000396578 DDX56Q9NY93 547 aaKnown RBP14.83□□□□□ -0.04
COL4A3-202ENST00000396578 SEPT3Q9UH03 358 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 PTPRKQ15262 1439 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 UBE4BO95155 1302 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 TCP11X1B4DZS4 312 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 ELF1P32519 619 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 LRRC31Q6UY01 552 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 RNF135Q8IUD6 432 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 GPBP1L1Q9HC44 474 aaPredicted RBP14.83□□□□□ -0.04
COL4A3-202ENST00000396578 KIAA1586Q9HCI6 787 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 BATF3Q9NR55 127 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 IP6K2Q9UHH9 426 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 TSC22D4Q9Y3Q8 395 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 ORC4O43929 436 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 ADCY3O60266 1144 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 PEX3P56589 373 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 CCDC137Q6PK04 289 aaKnown RBP14.83□□□□□ -0.04
COL4A3-202ENST00000396578 TMEM35BQ8NCS4 154 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 EGFL8Q99944 293 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 COPRSQ9NQ92 184 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 LEMD3Q9Y2U8 911 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 LMTK3Q96Q04 1460 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 MAP3K15Q6ZN16 1313 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 C16orf96A6NNT2 1141 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 GUCY1A3Q02108 690 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 CDR2LQ86X02 465 aaPredicted RBP14.83□□□□□ -0.04
COL4A3-202ENST00000396578 ZBED8Q8IZ13 594 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 ARHGEF1Q92888 912 aaKnown RBP14.83□□□□□ -0.04
COL4A3-202ENST00000396578 WWP1Q9H0M0 922 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 GOLPH3LQ9H4A5 285 aa14.83□□□□□ -0.04
COL4A3-202ENST00000396578 FAM98CQ17RN3 349 aaKnown RBP14.82□□□□□ -0.04
COL4A3-202ENST00000396578 NFRKBQ6P4R8 1299 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 TRIM54Q9BYV2 358 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 EPN3Q9H201 632 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 SENP1Q9P0U3 644 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 BLOC1S6Q9UL45 172 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 CLASP1Q7Z460 1538 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 CDH2P19022 906 aaPredicted RBP14.82□□□□□ -0.04
COL4A3-202ENST00000396578 PDIA2Q13087 525 aaKnown RBP14.82□□□□□ -0.04
COL4A3-202ENST00000396578 FASTKD1Q53R41 847 aaKnown RBP14.82□□□□□ -0.04
COL4A3-202ENST00000396578 TCOF1Q13428 1488 aaKnown RBP14.82□□□□□ -0.04
COL4A3-202ENST00000396578 FAM187AA6NFU0 413 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 ANGPT2O15123 496 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 TBXAS1P24557 533 aaPredicted RBP14.82□□□□□ -0.04
COL4A3-202ENST00000396578 PPHLN1Q8NEY8 458 aaKnown RBP14.82□□□□□ -0.04
COL4A3-202ENST00000396578 ARL8AQ96BM9 186 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 SERPINB13Q9UIV8 391 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 PCDHGB4Q9UN71 923 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 MYBL1P10243 752 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 ABCE1P61221 599 aaKnown RBP14.82□□□□□ -0.04
COL4A3-202ENST00000396578 UBE3AQ05086 875 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 DHX34Q14147 1143 aaKnown RBP14.82□□□□□ -0.04
COL4A3-202ENST00000396578 CASS4Q9NQ75 786 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 ZSCAN32Q9NX65 697 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 LRRC53A6NM62 1247 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 TMED10P49755 219 aaKnown RBP14.82□□□□□ -0.04
COL4A3-202ENST00000396578 DEFA1P59665 94 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 DEFA3P59666 94 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 TRAF7Q6Q0C0 670 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 USP17L2Q6R6M4 530 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.82□□□□□ -0.04
COL4A3-202ENST00000396578 TRADDQ15628 312 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms