RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 LAMTOR4Q0VGL1 99 aa13.94□□□□□ -0.18
TRIM39-204ENST00000396548 KCNMA1Q12791 1236 aa13.94□□□□□ -0.18
TRIM39-204ENST00000396548 PPP2R5AQ15172 486 aa13.94□□□□□ -0.18
TRIM39-204ENST00000396548 CCDC150Q8NCX0 1101 aa13.94□□□□□ -0.18
TRIM39-204ENST00000396548 ZSWIM2Q8NEG5 633 aa13.94□□□□□ -0.18
TRIM39-204ENST00000396548 CBWD1Q9BRT8 395 aa13.94□□□□□ -0.18
TRIM39-204ENST00000396548 ZNF215Q9UL58 517 aaPredicted RBP13.94□□□□□ -0.18
TRIM39-204ENST00000396548 FRMPD3Q5JV73 1810 aa13.94□□□□□ -0.18
TRIM39-204ENST00000396548 DUSP11O75319 330 aaKnown RBP13.93□□□□□ -0.18
TRIM39-204ENST00000396548 FECHP22830 423 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 HOXC8P31273 242 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 ADAM17P78536 824 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 CACNB2Q08289 660 aaPredicted RBP13.93□□□□□ -0.18
TRIM39-204ENST00000396548 MTHFD1LQ6UB35 978 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 HS2ST1Q7LGA3 356 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 CREBRFQ8IUR6 639 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 LRRC71Q8N4P6 559 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 FBXL18Q96ME1 805 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 JPH2Q9BR39 696 aaPredicted RBP13.93□□□□□ -0.18
TRIM39-204ENST00000396548 SAGE1Q9NXZ1 904 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 SRRDQ9UH36 339 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 CNGA1P29973 690 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 PSMC2P35998 433 aaKnown RBP13.93□□□□□ -0.18
TRIM39-204ENST00000396548 KLK7P49862 253 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 GJA9P57773 515 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 GOLGA8FQ08AF8 430 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 GOLGA8DPQ0D2H9 430 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 HIC1Q14526 733 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 MXD4Q14582 209 aaPredicted RBP13.93□□□□□ -0.18
TRIM39-204ENST00000396548 CCDC40Q4G0X9 1142 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 BRDTQ58F21 947 aaPredicted RBP13.93□□□□□ -0.18
TRIM39-204ENST00000396548 MAP3K21Q5TCX8 1036 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 EFCAB12Q6NXP0 572 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 CD99L2Q8TCZ2 262 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 SLC35C1Q96A29 364 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 PYCARDQ9ULZ3 195 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 EXOC7Q9UPT5 735 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 CPT1AP50416 773 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 FXR1P51114 621 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRIM39-204ENST00000396548 FIGNQ5HY92 759 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 MFSD14CQ5VZR4 134 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 PHLPP2Q6ZVD8 1323 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 SYCP3Q8IZU3 236 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 NFKBIZQ9BYH8 718 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 HAPLN2Q9GZV7 340 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 METTL14Q9HCE5 456 aaKnown RBP13.93□□□□□ -0.18
TRIM39-204ENST00000396548 HSPBP1Q9NZL4 362 aa13.93□□□□□ -0.18
TRIM39-204ENST00000396548 ESPNB1AK53 854 aa13.92□□□□□ -0.18
TRIM39-204ENST00000396548 GPR25O00155 361 aa13.92□□□□□ -0.18
TRIM39-204ENST00000396548 KLRC1P26715 233 aa13.92□□□□□ -0.18
TRIM39-204ENST00000396548 POU5F1BQ06416 359 aa13.92□□□□□ -0.18
TRIM39-204ENST00000396548 CCDC155Q8N6L0 562 aa13.92□□□□□ -0.18
TRIM39-204ENST00000396548 SUCLA2Q9P2R7 463 aaPredicted RBP13.92□□□□□ -0.18
TRIM39-204ENST00000396548 ARMCX3Q9UH62 379 aaPredicted RBP13.92□□□□□ -0.18
TRIM39-204ENST00000396548 SCN10AQ9Y5Y9 1956 aa13.92□□□□□ -0.18
TRIM39-204ENST00000396548 MYADML2A6NDP7 307 aa13.92□□□□□ -0.18
TRIM39-204ENST00000396548 MAGEB2O15479 319 aa13.92□□□□□ -0.18
TRIM39-204ENST00000396548 MSCO60682 206 aa13.92□□□□□ -0.18
TRIM39-204ENST00000396548 KIF22Q14807 665 aa13.92□□□□□ -0.18
TRIM39-204ENST00000396548 GRIK4Q16099 956 aa13.92□□□□□ -0.18
TRIM39-204ENST00000396548 C1orf220Q5T0J3 134 aa13.92□□□□□ -0.18
TRIM39-204ENST00000396548 IFNLR1Q8IU57 520 aaPredicted RBP13.92□□□□□ -0.18
TRIM39-204ENST00000396548 PSPC1Q8WXF1 523 aaKnown RBP13.92□□□□□ -0.18
TRIM39-204ENST00000396548 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRIM39-204ENST00000396548 MBLAC1A4D2B0 266 aaPredicted RBP13.91□□□□□ -0.18
TRIM39-204ENST00000396548 MFAP3LO75121 409 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 GNRH1P01148 92 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 GJB1P08034 283 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 EPB41P11171 864 aaKnown RBP13.91□□□□□ -0.18
TRIM39-204ENST00000396548 PURAQ00577 322 aaKnown RBP13.91□□□□□ -0.18
TRIM39-204ENST00000396548 PPP2R3AQ06190 1150 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 KCNH2Q12809 1159 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 SYCP1Q15431 976 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 FAM186BQ8IYM0 893 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.91□□□□□ -0.18
TRIM39-204ENST00000396548 SEPT4O43236 478 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 TPM2P07951 284 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 GARTP22102 1010 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 CASP14P31944 242 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 CYP2J2P51589 502 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 CLCN3P51790 818 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 ADKP55263 362 aaKnown RBP13.91□□□□□ -0.18
TRIM39-204ENST00000396548 BEX3Q00994 111 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 TRIM14Q14142 442 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 KIAA1524Q8TCG1 905 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 PLEKHO2Q8TD55 490 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 PANX2Q96RD6 677 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 SUGCTQ9HAC7 445 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 IFT122Q9HBG6 1241 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 CAPN11Q9UMQ6 739 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 A0A1W2PQJ5 194 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 TTLL13PA6NNM8 815 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 ABLIM1O14639 778 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 ASAP2O43150 1006 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 FSCN1Q16658 493 aaKnown RBP13.91□□□□□ -0.18
TRIM39-204ENST00000396548 XXYLT1Q8NBI6 393 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 DEPTORQ8TB45 409 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 PCIF1Q9H4Z3 704 aa13.91□□□□□ -0.18
TRIM39-204ENST00000396548 LRRIQ4A6NIV6 560 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 AKR1B15C9JRZ8 316 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms