RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 CTAGE15A4D2H0 777 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 FAM228BP0C875 321 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 CTAGE8P0CG41 777 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 UBA1P22314 1058 aaKnown RBP13.22□□□□□ -0.29
ITGB1-202ENST00000396033 VAMP7P51809 220 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 ARMC9Q7Z3E5 817 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 CTAGE6Q86UF2 777 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 CTAGE4Q8IX94 777 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 ZNF526Q8TF50 670 aaPredicted RBP13.22□□□□□ -0.29
ITGB1-202ENST00000396033 TMEM174Q8WUU8 243 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 SPIRE2Q8WWL2 714 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 C17orf75Q9HAS0 396 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 ZNF571Q7Z3V5 609 aaPredicted RBP13.22□□□□□ -0.29
ITGB1-202ENST00000396033 XPNPEP1Q9NQW7 623 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 SYNGAP1Q96PV0 1343 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 SLC25A27O95847 323 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 EDNRBP24530 442 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 NAP1L1P55209 391 aaKnown RBP13.22□□□□□ -0.29
ITGB1-202ENST00000396033 DLG4P78352 724 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 ZSWIM2Q8NEG5 633 aa13.22□□□□□ -0.29
ITGB1-202ENST00000396033 POLR3FQ9H1D9 316 aaPredicted RBP13.22□□□□□ -0.29
ITGB1-202ENST00000396033 EMSYQ7Z589 1322 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 GOLGA8IPA6NC78 632 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 GOLGA8JA6NMD2 632 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 SRGAP2O75044 1071 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 PNMA6AP0CW24 399 aaPredicted RBP13.21□□□□□ -0.29
ITGB1-202ENST00000396033 STAT1P42224 750 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 IFT74Q96LB3 600 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 R3HDMLQ9H3Y0 253 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 TXNRD2Q9NNW7 524 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 ANKRD63C9JTQ0 380 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 TULP1O00294 542 aaPredicted RBP13.21□□□□□ -0.29
ITGB1-202ENST00000396033 N4BP1O75113 896 aaKnown RBP13.21□□□□□ -0.29
ITGB1-202ENST00000396033 OATP04181 439 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 OSBPP22059 807 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 PRKCIP41743 596 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 CLCN6P51797 869 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 POLGP54098 1239 aaPredicted RBP13.21□□□□□ -0.29
ITGB1-202ENST00000396033 FASTKD5Q7L8L6 764 aaKnown RBP13.21□□□□□ -0.29
ITGB1-202ENST00000396033 EEPD1Q7L9B9 569 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 NOX5Q96PH1 765 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 PDLIM7Q9NR12 457 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 SALL4Q9UJQ4 1053 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 DNAJC12Q9UKB3 198 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 JRKLQ9Y4A0 524 aa13.21□□□□□ -0.29
ITGB1-202ENST00000396033 MYH9P35579 1960 aaKnown RBP13.21□□□□□ -0.3
ITGB1-202ENST00000396033 BUB1O43683 1085 aa13.21□□□□□ -0.3
ITGB1-202ENST00000396033 GFPT2O94808 682 aa13.21□□□□□ -0.3
ITGB1-202ENST00000396033 ATG7O95352 703 aa13.21□□□□□ -0.3
ITGB1-202ENST00000396033 FERP16591 822 aa13.21□□□□□ -0.3
ITGB1-202ENST00000396033 CETN1Q12798 172 aa13.21□□□□□ -0.3
ITGB1-202ENST00000396033 EMC2Q15006 297 aa13.21□□□□□ -0.3
ITGB1-202ENST00000396033 CAPZA3Q96KX2 299 aa13.21□□□□□ -0.3
ITGB1-202ENST00000396033 APEX2Q9UBZ4 518 aa13.21□□□□□ -0.3
ITGB1-202ENST00000396033 MAFBQ9Y5Q3 323 aaPredicted RBP13.21□□□□□ -0.3
ITGB1-202ENST00000396033 F8VZ95 297 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 MAPK13O15264 365 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 FARP2O94887 1054 aaPredicted RBP13.2□□□□□ -0.3
ITGB1-202ENST00000396033 PGK2P07205 417 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 MOGSQ13724 837 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 VPS36Q86VN1 386 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 SAAL1Q96ER3 474 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 STK33Q9BYT3 514 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 ADGRA3Q8IWK6 1321 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 GLTPD2A6NH11 291 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 ADRB2P07550 413 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 CNGA1P29973 690 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 ADSSP30520 456 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 COPB2P35606 906 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 SOX5P35711 763 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 GCLMP48507 274 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 RTP1P59025 263 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 DRAP1Q14919 205 aaPredicted RBP13.2□□□□□ -0.3
ITGB1-202ENST00000396033 KIAA0753Q2KHM9 967 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 WDR78Q5VTH9 848 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 RNF10Q8N5U6 811 aaKnown RBP13.2□□□□□ -0.3
ITGB1-202ENST00000396033 MPHOSPH6Q99547 160 aaKnown RBP13.2□□□□□ -0.3
ITGB1-202ENST00000396033 NTPCRQ9BSD7 190 aaKnown RBP13.2□□□□□ -0.3
ITGB1-202ENST00000396033 PACSIN1Q9BY11 444 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 TAF1DQ9H5J8 278 aaPredicted RBP13.2□□□□□ -0.3
ITGB1-202ENST00000396033 RBPJLQ9UBG7 517 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 ATP4AP20648 1035 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 PPP3CAQ08209 521 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 NEDD9Q14511 834 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 SNRNP35Q16560 246 aaKnown RBP13.2□□□□□ -0.3
ITGB1-202ENST00000396033 CAGE1Q8TC20 777 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 BICD1Q96G01 975 aa13.2□□□□□ -0.3
ITGB1-202ENST00000396033 CKAP4Q07065 602 aaKnown RBP13.19□□□□□ -0.3
ITGB1-202ENST00000396033 CBWD2Q8IUF1 395 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 MMP19Q99542 508 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 HNRNPDLO14979 420 aaKnown RBP13.19□□□□□ -0.3
ITGB1-202ENST00000396033 EVI5O60447 810 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 GGPS1O95749 300 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 ANXA13P27216 316 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 TUBB4BP68371 445 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 KCTD2Q14681 263 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 Q3C1V9 767 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 C10orf76Q5T2E6 689 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 PLEKHO2Q8TD55 490 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 DAAM1Q9Y4D1 1078 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms