RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ZWILCHQ9H900 591 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 CYP2D7A0A087X1C5 515 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 F5H6K3 240 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 PPP1R12AO14974 1030 aaPredicted RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 SLCO1A2P46721 670 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 KLRC3Q07444 240 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 DHX34Q14147 1143 aaKnown RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 TRIM45Q9H8W5 580 aaPredicted RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 XAB2Q9HCS7 855 aaKnown RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 GINM1Q9NU53 330 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 L3MBTL1Q9Y468 752 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 ATP6V1E1P36543 226 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 TMPRSS15P98073 1019 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 TOB2Q14106 344 aaPredicted RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 TEDDM1Q5T9Z0 273 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 TTC23LQ6PF05 361 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 PI16Q6UXB8 463 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 RHOT1Q8IXI2 618 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 LRRC43Q8N309 656 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 BANK1Q8NDB2 785 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 SNX19Q92543 992 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 PPP1R2P1Q96PQ5 205 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 OSBPL9Q96SU4 736 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 ZBED2Q9BTP6 218 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 GOLGA8IPA6NC78 632 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 GOLGA8JA6NMD2 632 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 ECE2O60344 883 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 MYCBPQ99417 103 aaPredicted RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 DCP1AQ9NPI6 582 aaPredicted RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 RBAKQ9NYW8 714 aaPredicted RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 LRRC7Q96NW7 1537 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 CD2BP2O95400 341 aaKnown RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 CYP2C19P33261 490 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 PSMC5P62195 406 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 ATP2C1P98194 919 aaPredicted RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 MXD4Q14582 209 aaPredicted RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 FAM133BQ5BKY9 247 aaKnown RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 SNRNP48Q6IEG0 339 aaKnown RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 SYT2Q8N9I0 419 aaPredicted RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 FAM213AQ9BRX8 229 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 MMTAG2Q9BU76 263 aaKnown RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 SLC9A2Q9UBY0 812 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 KCNB1Q14721 858 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 NBPF10Q6P3W6 841 aaKnown RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 KCND2Q9NZV8 630 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 SENP1Q9P0U3 644 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 PIK3R2O00459 728 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 MYL3P08590 195 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 SDC4P31431 198 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 SLC1A1P43005 524 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 CLCN6P51797 869 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 COASYQ13057 564 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 TXNRD1Q16881 649 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 ZNF394Q53GI3 561 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 ITPRIPL1Q6GPH6 555 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 ZNF564Q8TBZ8 553 aaPredicted RBP5.8□□□□□ -1.48
VPS13C-204ENST00000395898 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.8□□□□□ -1.481e-6■■□□□ 14
VPS13C-204ENST00000395898 TEKT2Q9UIF3 430 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 PCDHB8Q9UN66 801 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 PXDNLA1KZ92 1463 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 CRB1P82279 1406 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 GUCY2CP25092 1073 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 ADCY1Q08828 1119 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 PDIA5Q14554 519 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 GRM4Q14833 912 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 TRADDQ15628 312 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 SP8Q8IXZ3 490 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 TNIP3Q96KP6 325 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.8□□□□□ -1.48
VPS13C-204ENST00000395898 SPATS2LQ9NUQ6 558 aaKnown RBP5.8□□□□□ -1.48
VPS13C-204ENST00000395898 TPX2Q9ULW0 747 aaKnown RBP5.8□□□□□ -1.48
VPS13C-204ENST00000395898 YWHABP31946 246 aaKnown RBP5.8□□□□□ -1.48
VPS13C-204ENST00000395898 EFNA5P52803 228 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 TSGA10IPQ3SY00 556 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 MMP19Q99542 508 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 EIF2AK1Q9BQI3 630 aaKnown RBP5.8□□□□□ -1.48
VPS13C-204ENST00000395898 LXNQ9BS40 222 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 KATNAL1Q9BW62 490 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 SAYSD1Q9NPB0 183 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 WDR91A4D1P6 747 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 POTEMA6NI47 508 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 MAFGO15525 162 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 CTIFO43310 598 aaKnown RBP5.8□□□□□ -1.48
VPS13C-204ENST00000395898 AP2B1P63010 937 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 CYP27A1Q02318 531 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 BBS9Q3SYG4 887 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 MTBPQ96DY7 904 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 CEP19Q96LK0 163 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 STXBP3O00186 592 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 KSR1Q8IVT5 923 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 ST13P4Q8IZP2 240 aaPredicted RBP5.8□□□□□ -1.48
VPS13C-204ENST00000395898 KIRREL3Q8IZU9 778 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 GPD1LQ8N335 351 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 LPAR1Q92633 364 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 KRT82Q9NSB4 513 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 H3BRJ5 948 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 PFDN1O60925 122 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 GCLMP48507 274 aa5.8□□□□□ -1.48
VPS13C-204ENST00000395898 NOP14P78316 857 aaKnown RBP5.8□□□□□ -1.48
VPS13C-204ENST00000395898 DMTNQ08495 405 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms