RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 LAIR1Q6GTX8 287 aa15.58■□□□□ 0.08
VCPKMT-201ENST00000395859 RNF168Q8IYW5 571 aaPredicted RBP15.58■□□□□ 0.08
VCPKMT-201ENST00000395859 DSCC1Q9BVC3 393 aa15.58■□□□□ 0.08
VCPKMT-201ENST00000395859 AGO4Q9HCK5 861 aaKnown RBP15.58■□□□□ 0.08
VCPKMT-201ENST00000395859 STK39Q9UEW8 545 aa15.58■□□□□ 0.08
VCPKMT-201ENST00000395859 PCDHB15Q9Y5E8 787 aa15.58■□□□□ 0.08
VCPKMT-201ENST00000395859 SPDYE4A6NLX3 237 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 FAM170BA6NMN3 283 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 MEIS3P2A8K0S8 358 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 TEX28O15482 410 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 GDF9O60383 454 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 C1RP00736 705 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 RETP07949 1114 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 DARSP14868 501 aaKnown RBP15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 PHKA2P46019 1235 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 CLCN3P51790 818 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 UBE2SQ16763 222 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 SLC44A4Q53GD3 710 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 MAMSTRQ6ZN01 415 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 ZNF280BQ86YH2 543 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 ZNF687Q8N1G0 1237 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 ST13P5Q8NFI4 369 aaPredicted RBP15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 HDAC7Q8WUI4 952 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 PIBF1Q8WXW3 757 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 SMG7Q92540 1137 aaKnown RBP15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 MAP4K1Q92918 833 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 RPS6KC1Q96S38 1066 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 SDF4Q9BRK5 362 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 NT5C3AQ9H0P0 336 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 PSTPIP2Q9H939 334 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 RXFP1Q9HBX9 757 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 SEMA4GQ9NTN9 838 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 PCDHA6Q9UN73 950 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 PCDHA8Q9Y5H6 950 aa15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 ZFP37Q9Y6Q3 630 aaPredicted RBP15.57■□□□□ 0.08
VCPKMT-201ENST00000395859 DHX15O43143 795 aaKnown RBP15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 OFD1O75665 1012 aa15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 SDSP20132 328 aa15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 TARSP26639 723 aaKnown RBP15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 SMARCA1P28370 1054 aa15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 CSRP2Q16527 193 aa15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 IMMTQ16891 758 aaKnown RBP15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 PARM1Q6UWI2 310 aa15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 PRR23CQ6ZRP0 262 aa15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 ZNF710Q8N1W2 664 aa15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 DDX1Q92499 740 aaKnown RBP15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 LPPQ93052 612 aa15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 MRPL17Q9NRX2 175 aaKnown RBP15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 DACT1Q9NYF0 836 aa15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 MAFBQ9Y5Q3 323 aaPredicted RBP15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 FREM2Q5SZK8 3169 aa15.56■□□□□ 0.08
VCPKMT-201ENST00000395859 MEIS1O00470 390 aa15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 ZNF623O75123 536 aa15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 SOD2P04179 222 aa15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 SSBP05455 408 aaKnown RBP eCLIP15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 FGFR4P22455 802 aa15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 GPC3P51654 580 aa15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 UBXN2BQ14CS0 331 aa15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 NOMO2Q5JPE7 1267 aa15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 FAM160B1Q5W0V3 765 aa15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 GET4Q7L5D6 327 aaPredicted RBP15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 METTL13Q8N6R0 699 aa15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 CELF5Q8N6W0 485 aaKnown RBP15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 KDF1Q8NAX2 398 aaPredicted RBP15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 ZNF302Q9NR11 478 aa15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 CHST12Q9NRB3 414 aa15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 DPP7Q9UHL4 492 aa15.55■□□□□ 0.08
VCPKMT-201ENST00000395859 DDHD2O94830 711 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 GLUD1P00367 558 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 ADH1AP07327 375 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 CD72P21854 359 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 LIMK1P53667 647 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 MTAPQ13126 283 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 CEP55Q53EZ4 464 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 ZBTB41Q5SVQ8 909 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 PDXDC2PQ6P474 469 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 TAS1R1Q7RTX1 841 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 RRP36Q96EU6 259 aaKnown RBP15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 MAP3K14Q99558 947 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 HERC2P3Q9BVR0 1158 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 TMEM121BQ9BXQ6 578 aaPredicted RBP15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 PRKD2Q9BZL6 878 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 MARCH5Q9NX47 278 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 ZDHHC7Q9NXF8 308 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 ZMIZ1Q9ULJ6 1067 aa15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 MYH9P35579 1960 aaKnown RBP15.54■□□□□ 0.08
VCPKMT-201ENST00000395859 RALGAPA1Q6GYQ0 2036 aa15.53■□□□□ 0.08
VCPKMT-201ENST00000395859 SPDYE3A6NKU9 549 aa15.53■□□□□ 0.08
VCPKMT-201ENST00000395859 SOBPA7XYQ1 873 aa15.53■□□□□ 0.08
VCPKMT-201ENST00000395859 BACH1O14867 736 aa15.53■□□□□ 0.08
VCPKMT-201ENST00000395859 MAGEB2O15479 319 aa15.53■□□□□ 0.08
VCPKMT-201ENST00000395859 AFF1P51825 1210 aaKnown RBP15.53■□□□□ 0.08
VCPKMT-201ENST00000395859 LPAL2Q16609 132 aa15.53■□□□□ 0.08
VCPKMT-201ENST00000395859 SWSAP1Q6NVH7 229 aa15.53■□□□□ 0.08
VCPKMT-201ENST00000395859 LILRA6Q6PI73 481 aa15.53■□□□□ 0.08
VCPKMT-201ENST00000395859 GLB1LQ6UWU2 654 aa15.53■□□□□ 0.08
VCPKMT-201ENST00000395859 TMEM175Q9BSA9 504 aa15.53■□□□□ 0.08
VCPKMT-201ENST00000395859 PLEKHA4Q9H4M7 779 aa15.53■□□□□ 0.08
VCPKMT-201ENST00000395859 LY9Q9HBG7 655 aa15.53■□□□□ 0.08
VCPKMT-201ENST00000395859 WDR81Q562E7 1941 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms