RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 C19orf81C9J6K1 198 aa19.44■□□□□ 0.7
SREBF1-204ENST00000395756 CLSTN1O94985 981 aa19.44■□□□□ 0.7
SREBF1-204ENST00000395756 DLATP10515 647 aaKnown RBP19.44■□□□□ 0.7
SREBF1-204ENST00000395756 DMP1Q13316 513 aaPredicted RBP19.44■□□□□ 0.7
SREBF1-204ENST00000395756 NCAPG2Q86XI2 1143 aa19.44■□□□□ 0.7
SREBF1-204ENST00000395756 ZNF526Q8TF50 670 aaPredicted RBP19.44■□□□□ 0.7
SREBF1-204ENST00000395756 OTUD5Q96G74 571 aa19.44■□□□□ 0.7
SREBF1-204ENST00000395756 WDR78Q5VTH9 848 aa19.44■□□□□ 0.7
SREBF1-204ENST00000395756 VPS36Q86VN1 386 aa19.44■□□□□ 0.7
SREBF1-204ENST00000395756 PALB2Q86YC2 1186 aa19.44■□□□□ 0.7
SREBF1-204ENST00000395756 BICD1Q96G01 975 aa19.44■□□□□ 0.7
SREBF1-204ENST00000395756 STRA6Q9BX79 667 aa19.44■□□□□ 0.7
SREBF1-204ENST00000395756 ELP3Q9H9T3 547 aa19.44■□□□□ 0.7
SREBF1-204ENST00000395756 TOPORSQ9NS56 1045 aaPredicted RBP19.44■□□□□ 0.7
SREBF1-204ENST00000395756 RBM12Q9NTZ6 932 aaKnown RBP19.44■□□□□ 0.7
SREBF1-204ENST00000395756 RSPH14Q9UHP6 348 aa19.44■□□□□ 0.7
SREBF1-204ENST00000395756 KCNK3O14649 394 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 KCNA2P16389 499 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 TCP1P17987 556 aaKnown RBP19.43■□□□□ 0.7
SREBF1-204ENST00000395756 SOX5P35711 763 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 SMTNP53814 917 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 JAM2P57087 298 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 ACTR2P61160 394 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 FAM193AP78312 1265 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 ZNF746Q6NUN9 644 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-204ENST00000395756 ARHGEF19Q8IW93 802 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 TXLNBQ8N3L3 684 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 RNF10Q8N5U6 811 aaKnown RBP19.43■□□□□ 0.7
SREBF1-204ENST00000395756 GOLGA5Q8TBA6 731 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 CCDC102AQ96A19 550 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 MKNK1Q9BUB5 465 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 MAP3K20Q9NYL2 800 aaKnown RBP19.43■□□□□ 0.7
SREBF1-204ENST00000395756 TAS2R14Q9NYV8 317 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 BCCIPQ9P287 314 aaKnown RBP eCLIP19.43■□□□□ 0.7
SREBF1-204ENST00000395756 SLC9A2Q9UBY0 812 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 APEX2Q9UBZ4 518 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 L1RE1Q9UN81 338 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 CNGA1P29973 690 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 ADSSP30520 456 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 SFNP31947 248 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 HDXQ7Z353 690 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 GPC2Q8N158 579 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 TMEM143Q96AN5 459 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 CLMNQ96JQ2 1002 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 INPP4AQ96PE3 977 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-204ENST00000395756 OSGEPQ9NPF4 335 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 GINM1Q9NU53 330 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 CENPFP49454 3210 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 ADRB2P07550 413 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 LMNB1P20700 586 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 CASP8Q14790 479 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 LMBRD2Q68DH5 695 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-204ENST00000395756 LNX1Q8TBB1 728 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-204ENST00000395756 STK33Q9BYT3 514 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 TBX20Q9UMR3 447 aa19.43■□□□□ 0.7
SREBF1-204ENST00000395756 BZW2Q9Y6E2 419 aaKnown RBP19.43■□□□□ 0.7
SREBF1-204ENST00000395756 LRRIQ3A6PVS8 624 aaPredicted RBP19.42■□□□□ 0.7
SREBF1-204ENST00000395756 H2AFZP0C0S5 128 aa19.42■□□□□ 0.7
SREBF1-204ENST00000395756 PRKCEQ02156 737 aa19.42■□□□□ 0.7
SREBF1-204ENST00000395756 H2AFVQ71UI9 128 aa19.42■□□□□ 0.7
SREBF1-204ENST00000395756 OTUD6AQ7L8S5 288 aa19.42■□□□□ 0.7
SREBF1-204ENST00000395756 PPM1KQ8N3J5 372 aa19.42■□□□□ 0.7
SREBF1-204ENST00000395756 POMGNT1Q8WZA1 660 aa19.42■□□□□ 0.7
SREBF1-204ENST00000395756 H3BQF6 201 aa19.42■□□□□ 0.7
SREBF1-204ENST00000395756 GHRHRQ02643 423 aa19.42■□□□□ 0.7
SREBF1-204ENST00000395756 TMEM161BQ8NDZ6 487 aa19.42■□□□□ 0.7
SREBF1-204ENST00000395756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.42■□□□□ 0.75e-8■■□□□ 12.5
SREBF1-204ENST00000395756 SLC20A1Q8WUM9 679 aa19.42■□□□□ 0.7
SREBF1-204ENST00000395756 RNF181Q9P0P0 153 aa19.42■□□□□ 0.7
SREBF1-204ENST00000395756 LTBP3Q9NS15 1303 aa19.42■□□□□ 0.7
SREBF1-204ENST00000395756 ESYT3A0FGR9 886 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 FERP16591 822 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 GALCP54803 685 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 GTF2BQ00403 316 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 INTS8Q75QN2 995 aaKnown RBP19.41■□□□□ 0.7
SREBF1-204ENST00000395756 SULF1Q8IWU6 871 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 FBXO41Q8TF61 875 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 BTBD7Q9P203 1132 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 SNCAIPQ9Y6H5 919 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 IRF6O14896 467 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 HNRNPDLO14979 420 aaKnown RBP19.41■□□□□ 0.7
SREBF1-204ENST00000395756 FDX1P10109 184 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 TNFAIP3P21580 790 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 PPP2R5AQ15172 486 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 SNRNP35Q16560 246 aaKnown RBP19.41■□□□□ 0.7
SREBF1-204ENST00000395756 DAAM2Q86T65 1068 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 GPRASP2Q96D09 838 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 GPR88Q9GZN0 384 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 FER1L6Q2WGJ9 1857 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 ADGRA3Q8IWK6 1321 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 GTPBP10A4D1E9 387 aaKnown RBP19.41■□□□□ 0.7
SREBF1-204ENST00000395756 ZSCAN5CA6NGD5 496 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-204ENST00000395756 CALCAP01258 141 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 PSAPP07602 524 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 KLHL7Q8IXQ5 586 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 ATP6V0A1Q93050 837 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 DCPSQ96C86 337 aaKnown RBP19.41■□□□□ 0.7
SREBF1-204ENST00000395756 CSADQ9Y600 493 aa19.41■□□□□ 0.7
SREBF1-204ENST00000395756 LYPLA2O95372 231 aa19.4■□□□□ 0.7
SREBF1-204ENST00000395756 CETN1Q12798 172 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms