RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 MAPK7Q13164 816 aa15.44■□□□□ 0.06
CLIP2-203ENST00000395060 TLDC1Q6P9B6 456 aa15.44■□□□□ 0.06
CLIP2-203ENST00000395060 CAPN12Q6ZSI9 719 aa15.44■□□□□ 0.06
CLIP2-203ENST00000395060 FAM186BQ8IYM0 893 aa15.44■□□□□ 0.06
CLIP2-203ENST00000395060 SPIRE2Q8WWL2 714 aa15.44■□□□□ 0.06
CLIP2-203ENST00000395060 SH2D3AQ9BRG2 576 aa15.44■□□□□ 0.06
CLIP2-203ENST00000395060 KIF9Q9HAQ2 790 aa15.44■□□□□ 0.06
CLIP2-203ENST00000395060 TMEM120BA0PK00 339 aa15.44■□□□□ 0.06
CLIP2-203ENST00000395060 CCDC189A1A4V9 331 aa15.44■□□□□ 0.06
CLIP2-203ENST00000395060 C6orf229H3BNL8 230 aa15.44■□□□□ 0.06
CLIP2-203ENST00000395060 GPSM2P81274 684 aa15.44■□□□□ 0.06
CLIP2-203ENST00000395060 RFFLQ8WZ73 363 aa15.44■□□□□ 0.06
CLIP2-203ENST00000395060 YIPF3Q9GZM5 350 aa15.44■□□□□ 0.06
CLIP2-203ENST00000395060 ASTN1O14525 1302 aa15.44■□□□□ 0.06
CLIP2-203ENST00000395060 COL22A1Q8NFW1 1626 aaPredicted RBP15.44■□□□□ 0.06
CLIP2-203ENST00000395060 TISP43B9A030 160 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 DLATP10515 647 aaKnown RBP15.43■□□□□ 0.06
CLIP2-203ENST00000395060 NQO1P15559 274 aaKnown RBP15.43■□□□□ 0.06
CLIP2-203ENST00000395060 EIF3BP55884 814 aaKnown RBP15.43■□□□□ 0.06
CLIP2-203ENST00000395060 NCALDP61601 193 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 C10orf76Q5T2E6 689 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 ARMC9Q7Z3E5 817 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 PRUNE1Q86TP1 453 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 TPH2Q8IWU9 490 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 PRELID2Q8N945 189 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 ARHGEF2Q92974 986 aaKnown RBP15.43■□□□□ 0.06
CLIP2-203ENST00000395060 HOOK2Q96ED9 719 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 ZNF570Q96NI8 536 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 PNMA6FA0A0J9YX94 578 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 H0Y3Z8 333 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 FOXN3O00409 490 aaPredicted RBP15.43■□□□□ 0.06
CLIP2-203ENST00000395060 CALUO43852 315 aaPredicted RBP15.43■□□□□ 0.06
CLIP2-203ENST00000395060 RARAP10276 462 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 SOX5P35711 763 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 SCNN1DP51172 638 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 CACNB3P54284 484 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 GRAPQ13588 217 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 PRR5LQ6MZQ0 368 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 SLFN11Q7Z7L1 901 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 EXOC3L1Q86VI1 746 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 GRAPLQ8TC17 118 aaPredicted RBP15.43■□□□□ 0.06
CLIP2-203ENST00000395060 ATG4AQ8WYN0 398 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.43■□□□□ 0.062e-7■■■■■ 65.3
CLIP2-203ENST00000395060 GRHL1Q9NZI5 618 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 SLC12A4Q9UP95 1085 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 C15orf41Q9Y2V0 281 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 CCDC88AQ3V6T2 1871 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 FTLP02792 175 aaPredicted RBP15.43■□□□□ 0.06
CLIP2-203ENST00000395060 GSTO1P78417 241 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 CNGA2Q16280 664 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 DAB2IPQ5VWQ8 1189 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 FRMD5Q7Z6J6 570 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 RMDN2Q96LZ7 410 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 P2RX7Q99572 595 aaKnown RBP15.43■□□□□ 0.06
CLIP2-203ENST00000395060 KDM3AQ9Y4C1 1321 aa15.43■□□□□ 0.06
CLIP2-203ENST00000395060 EME2A4GXA9 379 aaPredicted RBP15.42■□□□□ 0.06
CLIP2-203ENST00000395060 AUHQ13825 339 aaKnown RBP15.42■□□□□ 0.06
CLIP2-203ENST00000395060 CRYMQ14894 314 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 C2CD6Q53TS8 623 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 PIGWQ7Z7B1 504 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 KAT5Q92993 513 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 TMEM237Q96Q45 408 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 ANO3Q9BYT9 981 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 PKD2L1Q9P0L9 805 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 RASAL2Q9UJF2 1139 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 CES2O00748 559 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 SPOPO43791 374 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 SNX3O60493 162 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 LDHCP07864 332 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 PYGMP11217 842 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 FERP16591 822 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 ZNF76P36508 570 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 EDRF1Q3B7T1 1238 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 BZW1Q7L1Q6 419 aaKnown RBP15.42■□□□□ 0.06
CLIP2-203ENST00000395060 MTRF1LQ9UGC7 380 aaKnown RBP15.42■□□□□ 0.06
CLIP2-203ENST00000395060 ASIC3Q9UHC3 531 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 NRAPQ86VF7 1730 aa15.42■□□□□ 0.06
CLIP2-203ENST00000395060 ESYT2A0FGR8 921 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 RIPK2O43353 540 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 COMTP21964 271 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 TCP10Q12799 353 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 KYNUQ16719 465 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 UBE2TQ9NPD8 197 aaPredicted RBP15.41■□□□□ 0.06
CLIP2-203ENST00000395060 FAM13AO94988 1023 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 CHKAP35790 457 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 GJC1P36383 396 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 MARSP56192 900 aaKnown RBP15.41■□□□□ 0.06
CLIP2-203ENST00000395060 JAM2P57087 298 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 ZNF543Q08ER8 600 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 QRICH1Q2TAL8 776 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 KIAA0825Q8IV33 1275 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 SRRM1Q8IYB3 904 aaKnown RBP15.41■□□□□ 0.06
CLIP2-203ENST00000395060 FITM2Q8N6M3 262 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 C3orf20Q8ND61 904 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 CRAMP1Q96RY5 1269 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 TXLNGYQ9BZA5 131 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 NSRP1Q9H0G5 558 aaKnown RBP15.41■□□□□ 0.06
CLIP2-203ENST00000395060 SRRM3A6NNA2 597 aaPredicted RBP15.41■□□□□ 0.06
CLIP2-203ENST00000395060 PDHA1P08559 390 aa15.41■□□□□ 0.06
CLIP2-203ENST00000395060 GHRP10912 638 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms